Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq25860 87.8 4e-12 >seq25860 Length=1350 Score = 87.8 bits (96), Expect = 4e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 ||||| ||||| ||||| || ||||| || |||||||| || ||||| | ||| Sbjct 810 AGACTCGTAGCGTTTGCGGCAGTAGAAGGAATCTTCTTTTCGGGCAGCTTCTGCTCGATC 869 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977 || ||||| |||||| | || | |||||||||||| | || || ||| || | ||| Sbjct 870 TTCTGGCTCAAGAAGAGGGGGCTTATGCCTGGACTCACCTTCTCGAATGAACTTATCAGC 929 Query 131978 AGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATA 132020 ||||| |||| |||| || |||||||| || |||||| Sbjct 930 AGAGACGAAGGCATGCACACACAATTTGCTTGCTTGCTCTATA 972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186167790237698