Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_024782.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq36599 87.8 4e-13 >seq36599 Length=799 Score = 87.8 bits (96), Expect = 4e-13 Identities = 219/326 (67%), Gaps = 20/326 (6%) Strand=Plus/Minus Query 20440 TCCGTCCACCACCGCCAGTAAC---ACCTATGGCTGGCTGGGGCAGTTCCCCAAGCTGCG 20496 |||||||| |||| || || ||||| | |||||| || || ||||| |||| Sbjct 600 TCCGTCCAGCACCC---GTGACCAGACCTACGCCTGGCTCGGCCAAATCCCCCGCATGCG 544 Query 20497 CGAGTGGATCGGTCA---GCGTGTCATCAAGGACATGGCGGCCCAGGGCTACCAGATCAC 20553 ||||||| | || | ||| |||||| | | | | ||| |||||| |||||| Sbjct 543 CGAGTGGCTTGGCGAAAAGCGG---ATCAAGAGCCTTGAAGTCCACGGCTACACGATCAC 487 Query 20554 CAA-CAAGCTCTTCGAATCGAC---CGTGGGCGTGAAACGTACCGACATCGAGGACGACA 20609 ||| | || |||||| || || || | || || ||||||||||||||| Sbjct 486 CAATCGAGAA-TTCGAACTCACTATCGAGGTCCCCAAG---ACTGACATCGAGGACGACC 431 Query 20610 ACCTCGGCGTCTACGGACCGCTCATGCAGGAAATGGGGCGCGCTGCCGGCGCGCATCCCG 20669 | ||||||||| || ||| | | |||| ||||| ||| ||| || | || | Sbjct 430 AGTACGGCGTCTATGGCCCGATGTTCGAGGAGATGGGACGCAGCGCCAACGAGTTCCCTG 371 Query 20670 ACGAGCTGGTCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAA 20729 | || || || ||| ||| ||||||| ||| | |||| | || | ||||| || | Sbjct 370 ATGAACTCGTTTTCAGCCTCCTCAAGGAGGGCTTCTCCAAGCCGTGTTTTGACGGGCAGA 311 Query 20730 ACTTCTTCGACACCGATCACCCGGTC 20755 ||||||||||||| || || |||||| Sbjct 310 ACTTCTTCGACACTGAGCATCCGGTC 285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117700682668800