Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq36835 84.2 2e-11 seq25823 84.2 2e-11 seq22711 84.2 2e-11 seq16860 84.2 2e-11 seq4283 84.2 2e-11 >seq36835 Length=903 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | |||| || ||||| ||||||||||| || ||| | ||| || Sbjct 641 ACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCCTCA 582 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | |||| || | ||||||||| || || || || || || || Sbjct 581 AGCTGCTTTCCAGCAAAGATGAGTCTCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGG 522 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| || | | || | ||| |||| ||||| || |||| || | || || Sbjct 521 ATCTTTGCCTTGACGTTCTCAATAGTGTCGGAAGGCTCAACATCGAGAGTGATGGTCTTT 462 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | ||| || ||||| Sbjct 461 CCAGTCAGGGTCTTGACGAAGATTTGCAT 433 >seq25823 Length=903 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | |||| || ||||| ||||||||||| || ||| | ||||| Sbjct 641 ACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGACAAGGTCCTGCCGTCTTCA 582 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | |||| || | ||||||||| || || || || || || || Sbjct 581 AGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGG 522 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| || | | ||| | || |||| ||||| || |||| || | || || Sbjct 521 ATCTTTGCCTTGACGTTTTCAATGGTGTCGGAAGGCTCAACATCGAGAGTGATGGTCTTT 462 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | ||| || ||||| Sbjct 461 CCAGTCAGGGTCTTGACGAAGATTTGCAT 433 >seq22711 Length=903 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | |||| || ||||| ||||||||||| || ||| | ||||| Sbjct 641 ACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGACAAGGTCCTGCCGTCTTCA 582 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | |||| || | ||||||||| || || || || || || || Sbjct 581 AGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGG 522 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| || | | || | ||| |||| ||||| || |||| || | || || Sbjct 521 ATCTTTGCCTTGACGTTCTCAATAGTGTCGGAAGGCTCAACATCGAGAGTGATGGTCTTT 462 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | ||| || ||||| Sbjct 461 CCAGTCAGGGTCTTGACGAAGATTTGCAT 433 >seq16860 Length=798 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | |||| || ||||| ||||||||||| || ||| | ||| || Sbjct 641 ACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCCTCA 582 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | |||| || | ||||||||| || || || || || || || Sbjct 581 AGCTGCTTTCCAGCAAAGATGAGTCTCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGG 522 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| || | | || | ||| |||| ||||| || |||| || | || || Sbjct 521 ATCTTTGCCTTGACGTTCTCAATAGTGTCGGAAGGCTCAACATCGAGAGTGATGGTCTTT 462 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | ||| || ||||| Sbjct 461 CCAGTCAGGGTCTTGACGAAGATTTGCAT 433 >seq4283 Length=919 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | |||| || ||||| ||||||||||| || ||| | ||||| Sbjct 279 ACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGACAAGGTCCTGCCGTCTTCA 338 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | |||| || | ||||||||| || || || || || || || Sbjct 339 AGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGG 398 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| || | | ||| | || |||| ||||| || |||| || | || || Sbjct 399 ATCTTTGCCTTGACGTTTTCAATGGTGTCGGAAGGCTCAACATCGAGAGTGATGGTCTTT 458 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | ||| || ||||| Sbjct 459 CCAGTCAGGGTCTTGACGAAGATTTGCAT 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476358488826480