Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq39418 93.3 4e-14 seq36835 93.3 4e-14 seq27931 93.3 4e-14 seq25823 93.3 4e-14 seq22711 93.3 4e-14 seq20653 93.3 4e-14 seq16860 93.3 4e-14 seq10818 93.3 4e-14 seq8188 93.3 4e-14 seq4283 93.3 4e-14 >seq39418 Length=937 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 200 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 141 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 140 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 81 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 80 AGACTGAGAGGAGG 67 >seq36835 Length=903 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 298 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 357 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 358 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 417 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 418 AGACTGAGAGGAGG 431 >seq27931 Length=569 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 298 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 357 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 358 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 417 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 418 AGACTGAGAGGAGG 431 >seq25823 Length=903 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 298 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 357 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 358 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 417 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 418 AGACTGAGAGGAGG 431 >seq22711 Length=903 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 298 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 357 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 358 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 417 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 418 AGACTGAGAGGAGG 431 >seq20653 Length=689 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 490 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 549 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 550 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 609 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 610 AGACTGAGAGGAGG 623 >seq16860 Length=798 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 298 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 357 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 358 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 417 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 418 AGACTGAGAGGAGG 431 >seq10818 Length=497 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 200 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 141 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 140 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 81 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 80 AGACTGAGAGGAGG 67 >seq8188 Length=937 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 738 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 797 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 798 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 857 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 858 AGACTGAGAGGAGG 871 >seq4283 Length=919 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 ||||| || ||||| || |||||||| || ||||| |||| || || || || || ||| Sbjct 622 GATAAGGAAGGTATCCCTCCCGATCAACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAA 563 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || | || | || || ||||||||||| || ||||||||| | ||||| ||| | Sbjct 562 GACGGCAGGACCCTCTCTGACTACAATATTCAGAAGGAATCCACCCTGCATTTGGTGCTC 503 Query 25388 AGATTGAGAGGAGG 25401 ||| |||||||||| Sbjct 502 AGACTGAGAGGAGG 489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444858399821760