Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq25860 196 7e-44 >seq25860 Length=1350 Score = 196 bits (216), Expect = 7e-44 Identities = 316/449 (70%), Gaps = 18/449 (4%) Strand=Plus/Plus Query 1455869 CGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCA 1455928 |||| ||||| | || ||||||||| |||| || ||||| || |||||| || |||| Sbjct 503 CGACAACGAGAGACACTTCATCAAGTACGTGCTAGCCTTCTT-CGCCGCATCAGACGGCA 561 Query 1455929 TCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTT 1455988 |||| |||||| |||| | || | ||| |||| |||| || || || | Sbjct 562 TCGTTCTTGAGAACTTGGCTATGAGATTCTGCACCGAGATCCAGGTGCCTGAAGCGCGGT 621 Query 1455989 TGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGA 1456048 || ||||| ||| |||| || ||||||||||||||||| |||||||| || || | Sbjct 622 GCTTCTACGGCTTCTAGATGATGATGGAAAACATCCACTCTGAGACCTACTCCCTGCTAA 681 Query 1456049 TCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGAC-ACG 1456107 ||||||||||| |||| |||| |||||| ||| |||||| |||| ||| || Sbjct 682 TCGACACCTACATCAACGACCAAAACGAGAAAGACTTCCTCTTCAAAGCCACAGACAACA 741 Query 1456108 GTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTC 1456167 ||||| |||| ||| ||||| |||||||| || ||||||| || | Sbjct 742 TCCCCGTC-GTGAAGAAGAAGGCTGACTGGGCCCTGCGTTGGATCA---------GCTCC 791 Query 1456168 GACA----CTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCG 1456222 |||| || || ||| | ||||| | ||||| || || || || ||||| || ||| Sbjct 792 GACAATAGCTACGCAGAGAGACTCGTAGCGTTTGCGGCAGTAGAAGGAATCTTCTTTTCG 851 Query 1456223 GGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTT 1456282 ||||| |||||| | ||||| |||||||||||| | || || ||||| || | || ||| Sbjct 852 GGCAGCTTCTGCTCGATCTTCTGGCTCAAGAAGAGGGGGCTTATGCCTGGAC-TCACCTT 910 Query 1456283 TAGCAACGAATTTATCAGTCGCGACGAAG 1456311 || ||| ||||||| | ||||||| Sbjct 911 CTCGAATGAACTTATCAGCAGAGACGAAG 939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7173719905935716