Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3222 136 5e-27 >seq3222 Length=1589 Score = 136 bits (150), Expect = 5e-27 Identities = 504/783 (64%), Gaps = 15/783 (2%) Strand=Plus/Minus Query 118692 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 118751 ||||| ||| |||||||| || || || || || || |||| | ||||| | Sbjct 1582 TTGACGAACTGGGGAAGGGCAATGGAGGCGAGGTTGCAGACAGCGACTTCATCGGCAGAG 1523 Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811 |||||||| || || || ||||||| ||||||| |||||| ||||| ||||| | | | Sbjct 1522 GTGTACTCGATGATCTCAGTGCACAGGTTTGAAGACTTAATAGTGCCTAAGTTTTGCT-A 1464 Query 118812 TTTGACTTTGTG-TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 ||| |||| | ||||||||||| ||||| ||||||||||| || || || || | || Sbjct 1463 GTTGCTTTTGCGGTTACACGCATCTTTGTAGAGCATGTATGGGGTGCCTGTTTCGATCTG 1404 Query 118871 GGACTTGAGAAT--AGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCC 118928 || | || | || ||||| | |||| | || || ||| | Sbjct 1403 ACTCTCAATGATCCATCC--CCAGAGTTACCTAGCTTTTATTGTCTTTCTGCCTCTCTTA 1346 Query 118929 TCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 118988 || | ||| |||| || || ||||||| |||||| | || |||| || Sbjct 1345 TCCTTCTCATACTGCTCATACAGCTTCTCAAACTACTCACCCCATGAATCATAGAGGCCA 1286 Query 118989 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 119048 || || || |||||| | |||| ||| | ||| | |||| |||| ||||||||| Sbjct 1285 GGACACTCATTTGGGCACATAAGAGTCCAATCGCCATCGACCTCCACCCTCTTCATGAAA 1226 Query 119049 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 119108 || ||||| | ||| | || |||| | ||| | || |||||| | ||| || Sbjct 1225 AGATCTGGCACCCACAAAGCATAGAACAAATCTCTCGCACGCTATTCTTCCTTCCCGTGG 1166 Query 119109 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 119168 || ||||| | ||||| ||| || |||||||| || || ||||| || ||| Sbjct 1165 TTCTTCTTCAACTGAAGGAAGTCATAGATGTCGGCGTGCCAGGGCTCAAGGTAGACGGCG 1106 Query 119169 ATTGACCCCTTAC---GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACA 119225 | || ||||| | | |||| | |||| || || || | || |||| | || Sbjct 1105 AAGGAACCCTTTCTTTTGCCACCACCTTGGTCAACGTATCTTGATGTATCGTTGTAGACT 1046 Query 119226 CGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG 119285 || | ||| || | | || | || | |||||||| || |||||| | | | Sbjct 1045 CGCAACATGGGCACTAACCCGTTAGAGTATCCATTTGTTCCACGAATATAACTATCAGAC 986 Query 119286 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345 ||||||| ||| ||| || |||||||| ||||| ||| || || | || Sbjct 985 GCTCTGATTCTGTGCATGGCTATCCCAATACCTCCTGCATGCTTCGAAATGATGGAACAT 926 Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC-- 119403 | | | || | | |||| || || || || ||| |||| | | | ||||| | Sbjct 925 TGCTTCAGCGTCTCAAAGATTCCTTCAATTGAATCATCCTTCATGTCCAGCAGGAAACAC 866 Query 119404 -AGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462 |||| ||| ||||| | ||||| ||||| ||||| ||||| ||||| || || || Sbjct 865 GAGCT---CATCTGAGGATTCGGTGTTCCAGCATTGAACAGAGTAGGTGTAGCATGTGTG 809 Query 119463 AAC 119465 ||| Sbjct 808 AAC 806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618107290196080