Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq39418 98.7 9e-16 seq36835 98.7 9e-16 seq27931 98.7 9e-16 seq25823 98.7 9e-16 seq22711 98.7 9e-16 seq20653 98.7 9e-16 seq16860 98.7 9e-16 seq10818 98.7 9e-16 seq8188 98.7 9e-16 seq4283 98.7 9e-16 seq39092 89.7 5e-13 seq5093 84.2 2e-11 >seq39418 Length=937 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 84 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 143 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 144 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 202 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 203 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 262 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 263 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 293 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || || ||||| || ||| ||||||||| |||||||||||||||||||| | |||| Sbjct 538 AAGACGAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTTCTGCCGTCT 597 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | || ||||||||||| || || | |||||| || | || | | || |||||| Sbjct 598 TCCAACTATTTGCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGGATTCCTTCTTTGTCC 657 Query 41771 ATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||||| | | ||||| | ||| || |||| || || || Sbjct 658 TGGATCTTAGCCTTCACGTTCTCGATGGTGTCTGATGGCTCGACGTCCAAGGTGATAGTC 717 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| || || || ||||| Sbjct 718 TTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 749 >seq36835 Length=903 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 414 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 355 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 354 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 296 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 295 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 236 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 235 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq27931 Length=569 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 414 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 355 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 354 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 296 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 295 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 236 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 235 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq25823 Length=903 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 414 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 355 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 354 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 296 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 295 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 236 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 235 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq22711 Length=903 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 414 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 355 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 354 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 296 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 295 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 236 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 235 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq20653 Length=689 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 606 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 547 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 546 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 488 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 487 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 428 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 427 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 397 >seq16860 Length=798 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 414 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 355 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 354 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 296 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 295 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 236 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 235 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq10818 Length=497 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 84 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 143 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 144 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 202 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 203 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 262 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 263 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 293 >seq8188 Length=937 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 854 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 795 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 794 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 736 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 735 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 676 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 675 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 645 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || || ||||| || ||| ||||||||| |||||||||||||| ||||| | |||| Sbjct 400 AAGACGAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAAAGGGTTCTGCCGTCT 341 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | || ||||||||||| || || | |||||| || | || | | || |||||| Sbjct 340 TCCAACTATTTGCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGGATTCCTTCTTTGTCC 281 Query 41771 ATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||||| | | ||||| | ||| || |||| || || || Sbjct 280 TGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGATGGCTCGACGTCCAAGGTGATAGTC 221 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| || || || ||||| Sbjct 220 TTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 189 >seq4283 Length=919 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| ||| ||||||||||| || ||||| |||||||| | |||| || Sbjct 506 CACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTCCTGCCGTCTTC 565 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| | |||||| || | || | | ||||| | | | Sbjct 566 AAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCTTCCTTAT-CTT 624 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | ||||| | |||||| |||| || || || | Sbjct 625 GAATCTTGGCCTTCACGTTTTCAATCGTGTCAGATGGCTCCACATCCAAAGTGATGGTCT 684 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || ||||| ||||| || || |||||||| Sbjct 685 TGCCAGTCAGAGTCTTGACAAAGATCTGCAT 715 >seq39092 Length=483 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || || ||||| || ||| ||||||||| |||||||||||||||||||| | |||| Sbjct 84 AAGACGAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTTCTGCCGTCT 143 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | || ||||||||||| || || | |||||| || | || | | || |||||| Sbjct 144 TCCAACTATTTGCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGGATTCCTTCTTTGTCC 203 Query 41771 ATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||||| | | ||||| | ||| || |||| || || || Sbjct 204 TGGATCTTAGCCTTCACGTTCTCGATGGTGTCTGATGGCTCGACGTCCAAGGTGATAGTC 263 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| || || || ||||| Sbjct 264 TTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 295 >seq5093 Length=302 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || || ||||| || ||| ||||||||| |||||||||||||||||||| | |||| Sbjct 152 AAGACGAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTTCTGCCGTCT 93 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | || ||||||||||| || || | |||||| || | || | | || |||||| Sbjct 92 TCCAACTATTTGCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGGATTCCTTCTTTGTCC 33 Query 41771 ATGATTTTTTGCTTCA 41786 ||| || ||||| Sbjct 32 TGGATCTTAGCCTTCA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462058874861600