Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq12968 194 2e-44 >seq12968 Length=2778 Score = 194 bits (214), Expect = 2e-44 Identities = 496/751 (66%), Gaps = 7/751 (1%) Strand=Plus/Plus Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089 || |||||| || ||||||| |||||||||| |||||||| |||| || || ||||| Sbjct 276 TAGTCTATCAGCCACAAATTATATATATTGAGCCATTAAGTTAGAATTCATACCAATAAG 335 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 | || || |||||| || ||| | | ||| || || || | | ||| || Sbjct 336 TTCAACTGGGAGAGCTGAGCATACAAACTCTAATTCAATTTATACAGCATTTGAAATAAT 395 Query 16150 ATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAA 16209 || || | | ||| ||| |||| ||||||| | | || ||| || || Sbjct 396 CTCCAAAATTCTTTCATTAGATATCTTATTATTTAAGTGTTTATAGAGTAAACATGCAAA 455 Query 16210 GTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCAT 16269 || || | ||||| |||||||| || ||||| || || || | || ||||| Sbjct 456 ATCAGTGTGCATGCCTTCATCTCTGCTTATGAGTTCATTACTGAATGTCAGACCAGGCAT 515 Query 16270 TTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTC 16329 | ||| || ||||| | |||||| || ||| ||||| || || || || ||||| || Sbjct 516 TAATCCGCGCTTCTTCATCCAGAAGATAGCACAGAATGAGCCTGAGAAAAAGATACCTTC 575 Query 16330 AACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTT 16389 || || || || || | ||||| ||| || || | | |||| | |||||||| Sbjct 576 AATAGCAGCGAATGCTACTAATCTTTCGGCATAGGAATTATCTGAG---CCTATCCATTT 632 Query 16390 CTGTACCCATTCGGCTTTTTGTTTTATACAATCC-ATCGTTTCT-ATGGCCTTAAACAAT 16447 |||||||||| |||| | |||| | | |||| | || || ||||| | Sbjct 633 TAAGGCCCATTCGGCCTTTT--TAGCAACAACCGGAATGTTTGTGATTGCTTTAAAAAGG 690 Query 16448 TTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAG 16507 ||||| || | ||| | || || |||||||| || | | ||| | |||||| Sbjct 691 AAGTCTTTATCTTATGGATCAGTGATGTAGGTATCAATGAGAAGAGAGTAGGTCTCTGAG 750 Query 16508 TGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACT 16567 || |||||||| || || | |||||| || ||||||| |||||| | |||| | | Sbjct 751 TGAATGTTCTCCATCATCATTTAAAATCCGTAAAAGCATCTAGCCTCAGGAATTTAGATT 810 Query 16568 TCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627 || | | || | || |||| |||||| || || || ||||| ||||| ||||| Sbjct 811 TCAGTGCAGAACCTTTAAGCCAAATTCTCAAGAACTATTCCATCACTAGCAGCGAAAAAG 870 Query 16628 GCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAA 16687 || | | |||||||| || | |||||| || | || | | ||| ||||| | | Sbjct 871 GCAAGAACATGCTTAATAAAGTGTTTTTCACCATCGTTGAGTTTTTCCCAGTCTTTAACA 930 Query 16688 TCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATT 16747 || | | || || | ||| || | ||||| |||| ||||| | | ||| ||||| Sbjct 931 TCAGTAGCTAAGTCTATTTCCTCAGCAGTCCAGAAGCAAGCCATTTAATCTTTGTACATC 990 Query 16748 TTCCAAATATCATTGTATTGTATGGGAAATA 16778 ||||| |||||||||||| ||||| |||| Sbjct 991 TTCCATATATCATTGTATCTGATGGGTAATA 1021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511284986586080