Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq8537 87.8 1e-12 >seq8537 Length=3923 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 12780 AATGGTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATC 12839 ||| ||||| | ||||| | |||||| || || || || | |||||| || || || || Sbjct 678 AATAGTCATTCTGCTAGGTATGGCATGAGGATTGATAATAAGATCAGGCACAATTCCTTC 737 Query 12840 TTTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGT 12899 | ||||||| ||||| | ||||| ||| ||||||| || ||||| | | Sbjct 738 TCTAGTGAATGGCATATCTTCTTATCTATAGGTCATACCGACCGTTCCTTTCTAACCATG 797 Query 12900 AAAAGAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTAATTTAATTTTAAC 12959 | |||||||||||||||||||| ||||||| || || | | ||| |||||||| Sbjct 798 CCTACTAGCAAATTTATCTCCTATTTAAGGTATTCTTACGGACCTTGTTTTTATTTTAAC 857 Query 12960 A 12960 | Sbjct 858 A 858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328283784605176