Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3539 95.1 1e-14 >seq3539 Length=1811 Score = 95.1 bits (104), Expect = 1e-14 Identities = 218/323 (67%), Gaps = 23/323 (7%) Strand=Plus/Plus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| |||| || || || || ||||| || ||||||||||| ||||| || |||||| Sbjct 1125 AAGAATGGGACTTAGGCCCAGTATATGGCTTCCAATGGAGACACTTTGGCGCAGAATATA 1184 Query 20273 TTGACATGAACACAAATTATTT-----TGGACAAG---------GAGTAGATCAATTACA 20318 | ||| || | | |||| | | ||| | || ||| ||||| | Sbjct 1185 ATACTATG--CATGATTCATTTGAAGATATATAAGAGCGTGGGGGCGTCGATTAATTAGA 1242 Query 20319 AAATGTTATTAATTTAATTAAAA-CGAACCCAAACGACAGAAGAATTATTTTATGCGCCT 20377 | | || || |||| ||||||| | |||| || | ||||||||||| | |||| | Sbjct 1243 ATAGGTGATAAATTAGATTAAAAACCAACCAGAATCA-AGAAGAATTATAATGAGCGCAT 1301 Query 20378 GGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTT 20436 |||| | |||||| || ||||||| | || || || ||| | || ||| ||||| Sbjct 1302 GGAATCCAAAAGATCTGAAGAAAATGGCTCTTCCACCCTGCCATGTACT-TGCACAATTC 1360 Query 20437 TACGTT---GCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGA 20493 || || || | ||| | | || ||||||||||||||| | || ||||||||| Sbjct 1361 TATGTGTCAGCAGACAATAAGCTATCATGTCAAATGTATCAAAGGTCTTGTGATATGGGT 1420 Query 20494 CTGGGTGTTCCTTTCAATATTGC 20516 || || || || |||||||| || Sbjct 1421 CTTGGAGTGCCATTCAATATAGC 1443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399085511826580