Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq13015 100 6e-16 >seq13015 Length=2880 Score = 100 bits (110), Expect = 6e-16 Identities = 226/337 (67%), Gaps = 2/337 (1%) Strand=Plus/Plus Query 248808 AGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAAT 248867 ||||| ||| ||||||||||||| || ||||| | ||||| || ||| | |||||| | Sbjct 697 AGATTGGGATTACGATTTCTTTGGCTTTAAAACCTTAGAGAAGTCCTATTTACTCAAAGT 756 Query 248868 TGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCA 248927 | |||| || ||||| |||||| ||| | ||||||||| |||| | | || || || Sbjct 757 TCATGGAAAAATCGTTGAACGACCTCAATAAATGTTGATGAGAGTATCCATAGGAATCCA 816 Query 248928 CAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGAC 248987 ||| |||| || |||| | | || || || |||| || ||| | || Sbjct 817 CAAAAATGATGTAAAGAGAGCTATTGAAACTTATCATTTAATGTCAGATAAATGGTTTAC 876 Query 248988 ACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAA-CAATCAGCTGAGCTCGTGCT 249046 |||||||| || || | |||||| | ||||| ||| | || | || || || | Sbjct 877 TCATGCCACTCCTACTTTATTCAACTCTGGTACACCCAAGCCAT-AAATGTCTTCATGTT 935 Query 249047 TTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGG 249106 | ||| | | ||| ||||||| || | | || || || || || |||| ||| || | Sbjct 936 TCCTTTTGACTATGAAAGACGATTCAATACAAGGTATCTACGATACTCTTAGACAAACTG 995 Query 249107 CGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTC 249143 | || ||||| | || || ||||| || || || Sbjct 996 CTTTAATATCTAAGTCAGCTGGTGGAATTGGACTTTC 1032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073487890497792