Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq12968 230 2e-55 >seq12968 Length=2778 Score = 230 bits (254), Expect = 2e-55 Identities = 592/888 (67%), Gaps = 29/888 (3%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 |||| |||||| | ||||| || ||||| ||||| || || ||| ||||| || || Sbjct 157 TTTTAATATTCCCCGACTCTCTTCTCAAAGAAGTTTGTCTTGCCTGGTAGTGAAATCATT 216 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAATA 13486 ||||| | || ||||||||| |||| | |||| || |||| | || | Sbjct 217 TCCATCCACTCAAATGGATTTAAC-ACATTGTAGTACTTAGGTACT-CCTAAAGCAAAGA 274 Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546 || ||||||||| | ||| | |||||||||| |||||| | | |||||||||| || | Sbjct 275 GTAGTCTATCAGCCACAAATTATATATATTGAGCCATTAAGTTAGAATTCATACCAATAA 334 Query 13547 GTTTTACAGGAATTATATTAGT-TAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATA 13605 ||| || || | | | || || ||| ||| ||| || | ||||| | || | Sbjct 335 GTTCAACTGGGAG-AGCTGAGCATACAAACTCTAATTCAATTTATACAGCAT---TTGAA 390 Query 13606 ATAATCTTAATAATG---TCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACAC 13662 ||||||| | ||| |||||||| || |||| |||||| | | |||||| Sbjct 391 ATAATCTCCAAAATTCTTTCATTAGATATCTTATTATTTAAGTGTTTATAGAGTAAACAT 450 Query 13663 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13722 ||||||||| || | ||| |||||||| || || ||||| || ||||| | || Sbjct 451 GCAAAATCAGTGTGCATGCCTTCATCTCTGCTTATGAGTTCATTACTGAATGTCAGACCA 510 Query 13723 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 13782 ||||| ||||| || || || | ||| || || ||| |||||| || || || || || Sbjct 511 GGCATTAATCCGCGCTTCTTCATCCAGAAGATAGCACAGAATGAGCCTGAGAAAAAGATA 570 Query 13783 CCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGA---T 13839 || |||| ||||| || |||| || || ||| || | || || | ||| | Sbjct 571 CCTTCAATAGCAGCGAATGCTACTAATCTTTCGGCATAGGAA------TTATCTGAGCCT 624 Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC--ATTGTTTC-GATTGCA 13896 ||||||||| |||||||| | ||||| || || || | ||||| |||||| Sbjct 625 ATCCATTTTAAGGCCCATTCGGCCTTTTTAGCAACAA---CCGGAATGTTTGTGATTGCT 681 Query 13897 TTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TA 13955 || || | || || |||| | | | ||||| |||||||| || ||| | || Sbjct 682 TTAAAAAGGAAGTCTTTATCTTATGGATCAGTGATGTAGGTATCAATGAG-AAGAGAGTA 740 Query 13956 CATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14015 | || ||||| ||||| || || || | ||| || ||||| |||||||| || | Sbjct 741 GGTCTCTGAGTGAATGTTCTCCATCATCATTTAAAATCCGTAAAAGCATCTAGCCTCAGG 800 Query 14016 CCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGC 14075 || | || | | | || |||| ||||| || ||| ||| || ||||||||||| Sbjct 801 AATTTAGATTTCAGTGCAGAACCTTTAAGCCAAATTCTCAAGAACTATTCCATCACTAGC 860 Query 14076 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCA 14135 || ||||| || | | | |||||||||| || || ||| ||||||||||| ||| Sbjct 861 AGCGAAAAAGGCAAGAACATGCTTAATAAAGTGTTTTTCACCATCGTTGAGTTTTTCCCA 920 Query 14136 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14195 || | ||| ||| | |||| ||| ||| | ||||| || | ||| | | Sbjct 921 GTCTTTAACATCAGTAGCTAAGTCTATTTCCTCAGCAGTCCAGAAGCAAGCCATTTAATC 980 Query 14196 TTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14243 ||| ||||| |||||| || || ||| || || || | |||||| Sbjct 981 TTTGTACATCTTCCATATATCATTGTATCTGATGGGTAATATTACAAA 1028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478467693104160