Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq3091 82.4 6e-11 >seq3091 Length=1223 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| | ||||| || || | ||||| ||| |||||| | | ||||||||||| Sbjct 380 CCTCCTCTAAGTCTCAAAACTAGATGGAGAGTAGACTCCTTCTAGATGTTGTAATCGGAG 321 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | || |||||||| ||||| || || || | || |||||||||| || Sbjct 320 AGGGTTCTGCCATCTTCCAATTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGAGGG 261 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| | ||||| | ||| ||||| | ||| ||| Sbjct 260 ATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACG 201 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || || || || ||||||| || || || ||||| | ||| || Sbjct 200 TCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTT 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381275507062152