Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3091 152 5e-32 seq3090 152 5e-32 seq3089 152 5e-32 seq11541 113 4e-20 seq14708 109 5e-19 seq3088 95.1 1e-14 >seq3091 Length=1223 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| || |||||||| | ||||| | || | ||| | Sbjct 610 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 669 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || || ||||||||| Sbjct 670 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 729 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||||||||| || || |||||||||||||||| |||| | || ||||| || Sbjct 730 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 789 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| || |||||| ||||| |||| || ||| | ||||| |||| Sbjct 790 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAA 838 Score = 134 bits (148), Expect = 1e-26 Identities = 172/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 26762 AAACAAAA--TGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 |||||||| || | | || || || || ||||| || || | || || | || || Sbjct 145 AAACAAAACATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTA 204 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 || || |||||||| ||| | ||||| ||||| ||||| ||||| || ||| Sbjct 205 GAGCCATCAGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCT 264 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 |||||||||||||||||||| | || ||||| ||| | ||||||| |||| | || | Sbjct 265 CCCGATCAACAAAGACTCATCTTCGCTGGCAAGCAATTGGAAGATGGCAGAACCCTCTCC 324 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||| | || || |||||| ||||||| || |||||||||||||||| Sbjct 325 GATTACAACATCTAGAAGGAGTCTACTCTCCATCTAGTTTTGAGACTTAGAGGAGG 380 Score = 114 bits (126), Expect = 1e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || || || ||||| || | |||||| | || | || || Sbjct 837 AATGTAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGATGTTGAGCCATC 896 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | ||||| |||||| || || || || || || |||||||| Sbjct 897 TGACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCA 956 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 | ||||| | || | || || || ||| | ||||||| |||| | ||||||||| Sbjct 957 ATAAAGATTGATCTTCGCAGGAAAGCAATTGGAAGATGGAAGAACTCTATCCGACTATAA 1016 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAATATGA 27005 ||| ||||| || || ||| ||||| |||| || ||||| ||||| ||| || |||| Sbjct 1017 CATCCAAAAGGAGTCAACTCTCCATTTGGTGCTCAGACTAAGAGGTGGACAATGATGA 1074 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||| || | || || || || | ||||| || | ||||| |||| | ||| || Sbjct 382 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGACGTTGAACCATCA 441 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | || || ||||| || || ||||| || || ||||||||| Sbjct 442 GACACTATTGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGCATCCCACCCGATCAA 501 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||||||| | | ||| |||||||| ||||||| |||| | | |||||||| ||| Sbjct 502 CAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTACAAC 561 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || | || || || || |||| | || ||||||| ||||| || Sbjct 562 ATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGACTCAGAGGTGG 608 >seq3090 Length=995 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| || |||||||| | ||||| | || | ||| | Sbjct 382 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 441 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || || ||||||||| Sbjct 442 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 501 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||||||||| || || |||||||||||||||| |||| | || ||||| || Sbjct 502 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 561 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| || |||||| ||||| |||| || ||| | ||||| |||| Sbjct 562 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAA 610 Score = 116 bits (128), Expect = 4e-21 Identities = 168/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 26762 AAACAAAA--TGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 |||||||| || | | || || || || ||||| || || | || || | || || Sbjct 145 AAACAAAACATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTA 204 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 || || |||||||| ||| | ||||| ||||| ||||| ||||| || || Sbjct 205 GAGCCATCAGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCA 264 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 |||||||||||||||||||| | | ||| |||||||| ||||||| |||| | | ||| Sbjct 265 CCCGATCAACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGC 324 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| | || || || || |||| | || ||||||| ||||| || Sbjct 325 GACTACAACATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGACTCAGAGGTGG 380 Score = 114 bits (126), Expect = 1e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || || || ||||| || | |||||| | || | || || Sbjct 609 AATGTAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGATGTTGAGCCATC 668 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | ||||| |||||| || || || || || || |||||||| Sbjct 669 TGACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCA 728 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 | ||||| | || | || || || ||| | ||||||| |||| | ||||||||| Sbjct 729 ATAAAGATTGATCTTCGCAGGAAAGCAATTGGAAGATGGAAGAACTCTATCCGACTATAA 788 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAATATGA 27005 ||| ||||| || || ||| ||||| |||| || ||||| ||||| ||| || |||| Sbjct 789 CATCCAAAAGGAGTCAACTCTCCATTTGGTGCTCAGACTAAGAGGTGGACAATGATGA 846 >seq3089 Length=958 Score = 152 bits (168), Expect = 5e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| || |||||||| | ||||| | || | ||| | Sbjct 382 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 441 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || || ||||||||| Sbjct 442 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 501 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||||||||| || || |||||||||||||||| |||| | || ||||| || Sbjct 502 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 561 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| || |||||| ||||| |||| || ||| | ||||| |||| Sbjct 562 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAA 610 Score = 116 bits (128), Expect = 4e-21 Identities = 168/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 26762 AAACAAAA--TGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 |||||||| || | | || || || || ||||| || || | || || | || || Sbjct 145 AAACAAAACATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTA 204 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 || || |||||||| ||| | ||||| ||||| ||||| ||||| || || Sbjct 205 GAGCCATCAGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCA 264 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 |||||||||||||||||||| | | ||| |||||||| ||||||| |||| | | ||| Sbjct 265 CCCGATCAACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGC 324 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| | || || || || |||| | || ||||||| ||||| || Sbjct 325 GACTACAACATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGACTCAGAGGTGG 380 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||| || | || || || || || ||||| || | |||||| | || | || || Sbjct 609 AATGTAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGATGTTGAGCCATC 668 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | ||||| |||||| || || || || || || |||||||| Sbjct 669 TGACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCA 728 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 | ||||| | || | || || |||||||| ||||||| |||| | | | | ||||||| Sbjct 729 ATAAAGATTGATCTTCGCTGGTAAACAACTTGAAGATGGAAGAA-CATTATCTGACTATA 787 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||| ||||| || | ||| | || | ||| | |||||||| Sbjct 788 ACATTCAAAAGGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 836 >seq11541 Length=746 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||| || | || || |||||| | ||||| ||| | |||||| | || | || | Sbjct 152 AAAATGTAAATTTTCGTTAAAACACTCACTGGCAAAACTATCACCTTAGATGTTGAGCCC 211 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || || || || | |||||| |||||| ||||| || || || || |||||| Sbjct 212 TCAGATACAATTGAAAACGTCAAAGCTAAGATTTAGGACAAGGAGGGCATCCCACCCGAT 271 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTA 26944 ||| | |||||||| | || || ||||| || ||||||| |||| | | | | ||||| Sbjct 272 CAATAGAGACTCATATTCGCTGGAAAACAGCTAGAAGATGGAAGAA-CATTATCAGACTA 330 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||||||||||| | || | ||| ||||| | |||||||| Sbjct 331 CAACATCTAAAAAGAATCTACATTACACTTAGTCTTGAGATTAAGAGGAGG 381 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || ||||||||||||||||| | || || | || | || || ||||| || Sbjct 392 TTCGTTAAAACATTAACTGGAAAGACCATTACTTTAGATGTTGAGCCATCTGACACAATT 451 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | || ||| ||| || || || ||||| || || ||||||||| ||||| | Sbjct 452 GAAAATGTTAAAGCAAAAATCTAAGATAAGGAAGGTATTCCACCCGATCAATAAAGATTG 511 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAA 26956 || | | || ||| | || ||||||| || ||| | | | |||||||||||||| || Sbjct 512 ATCTTTGCAGGAAAATAGCTTGAAGATGGAAG-AACTTTATCTGACTATAACATTCAGAA 570 Query 26957 AGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || | ||| | || | ||| | |||||||| Sbjct 571 GGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 609 >seq14708 Length=579 Score = 109 bits (120), Expect = 5e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || ||||| | |||||||| | || ||| | || |||| || || ||||| Sbjct 14 TTCGTTAAAACTCTTACTGGAAAGACCATTACCTTGGACGTAGAGCCATCAGATACCATT 73 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 ||| | || ||| |||||| ||||||||||| || || || |||||| | |||||| Sbjct 74 GAGAATGTGAAAGCAAAGATCTAGGACAAAGAAGGTATTCCACCTGATCAATAGAGACTC 133 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAA 26956 || | || || ||||| | ||||||| || ||| | | | ||||| ||||| |||| Sbjct 134 ATATTCGCTGGTAAACAGTTAGAAGATGGAAG-AACATTATCAGACTACAACATCTAAAA 192 Query 26957 AGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||| | || | ||| ||||| | |||||||| Sbjct 193 AGAATCTACATTACACTTAGTCTTGAGATTAAGAGGAGG 231 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || ||||||||||||||||| | || || | || | || || ||||| || Sbjct 242 TTCGTTAAAACATTAACTGGAAAGACCATTACTTTAGATGTTGAGCCATCTGACACAATT 301 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | || ||| ||| || || || ||||| || || ||||||||| ||||| | Sbjct 302 GAAAATGTTAAAGCAAAAATCTAAGATAAGGAAGGTATTCCACCCGATCAATAAAGATTG 361 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAA 26956 || | | || ||| | || ||||||| || ||| | | | |||||||||||||| || Sbjct 362 ATCTTTGCAGGAAAATAGCTTGAAGATGGAAG-AACTTTATCTGACTATAACATTCAGAA 420 Query 26957 AGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || | ||| | || | ||| | |||||||| Sbjct 421 GGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 459 >seq3088 Length=519 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||| || | || || |||||| | ||||| ||| | |||||| | || | || | Sbjct 153 AAAATGTAAATTTTCGTTAAAACACTCACTGGCAAAACTATCACCTTAGATGTTGAGCCC 212 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || || || || | || ||| |||||| |||||||| || || || |||||| Sbjct 213 TCAGATACAATTGAAAACGTGAAAGCTAAGATTTAGGACAAAGAGGGCATCCCACCCGAT 272 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTA 26944 ||| ||||| | || | | || ||| | || ||||||| |||| | | | | ||||| Sbjct 273 CAATAAAGATTGATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAA-CTTTATCTGACTA 331 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||| || ||||| || | ||| | || | ||| | |||||||| Sbjct 332 TAACATTCAGAAGGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478541274479680