Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3091 203 6e-47 seq3090 181 2e-40 seq3089 181 2e-40 seq14708 178 2e-39 seq11541 165 2e-35 >seq3091 Length=1223 Score = 203 bits (224), Expect = 6e-47 Identities = 186/235 (79%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | ||||| | ||| | ||| || | || || || ||||| || | |||||| | Sbjct 388 TTTACATACCTCCTCTAAGTCTCAAAACTAGATGGAGAGTAGACTCCTTCTAGATGTTGT 329 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||||||||| || || |||||||| || ||||| || ||||| |||||||||||||| | Sbjct 328 AATCGGAGAGGGTTCTGCCATCTTCCAATTGCTTGCCAGCGAAGATGAGTCTTTGTTGAT 269 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 |||| || || |||||||||||||| ||||| ||||||||| ||| |||||||||| || Sbjct 268 CGGGAGGGATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATG 209 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || ||||| || || || | |||||| ||||| |||| ||| Sbjct 208 GCTCTACGTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACAT 154 Score = 176 bits (194), Expect = 8e-39 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || ||||| |||||||||||||| ||||| || || || |||||||| Sbjct 1046 ACCAAATGGAGAGTTGACTCCTTTTGGATGTTATAGTCGGATAGAGTTCTTCCATCTTCC 987 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || ||||| || | ||||| ||| |||||||| || || ||||| |||||| Sbjct 986 AATTGCTTTCCTGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTTGA 927 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||||| ||| |||||||| | || || || || | ||||||||| || Sbjct 926 ATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTCTTG 867 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | ||||||||||| || | |||| Sbjct 866 CCAGTCAAAGTCTTGACGAAGATTTACATT 837 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || ||||| || | |||||| || ||| | || || ||||| Sbjct 594 CAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTGCCATC 535 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | || || ||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct 534 TTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTATC 475 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| ||||| ||| ||| || ||||||| || ||| || || | |||||||| Sbjct 474 TTGGATCTTGGCCTTCACGTTCTCAATAGTGTCTGATGGTTCAACGTCGAGAGTGATGGT 415 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||||||||| ||||| || | ||| Sbjct 414 CTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 382 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || ||||| |||||||| || || || || || || |||||||| Sbjct 818 ACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCCATCTTCG 759 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | || || || ||||| |||||||||||||| ||||| ||||| ||||||||||| | Sbjct 758 AGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAG 699 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||||||| ||||||||||||| | ||| || || | |||||||| ||| Sbjct 698 ATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGATGGTCTTT 639 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | || |||||||| || ||||| Sbjct 638 CCAGTCAAAGTTTTGACGAAGATTTGCAT 610 >seq3090 Length=995 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || ||||| || | |||||| || ||| | || || ||||| Sbjct 366 CAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTGCCATC 307 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | || || ||||| || |||||||||||||| |||||||| |||||||||||||| Sbjct 306 TTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTGTC 247 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| ||||||||| ||| |||||||||| || ||||| ||||| || ||||| Sbjct 246 TTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGTAATGGT 187 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||| ||||| |||| ||| Sbjct 186 CTTACCGGTTAAGGTCTTAACGAAAATCTACAT 154 Score = 176 bits (194), Expect = 8e-39 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || ||||| |||||||||||||| ||||| || || || |||||||| Sbjct 818 ACCAAATGGAGAGTTGACTCCTTTTGGATGTTATAGTCGGATAGAGTTCTTCCATCTTCC 759 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || ||||| || | ||||| ||| |||||||| || || ||||| |||||| Sbjct 758 AATTGCTTTCCTGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTTGA 699 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||||| ||| |||||||| | || || || || | ||||||||| || Sbjct 698 ATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTCTTG 639 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | ||||||||||| || | |||| Sbjct 638 CCAGTCAAAGTCTTGACGAAGATTTACATT 609 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || ||||| |||||||| || || || || || || |||||||| Sbjct 590 ACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCCATCTTCG 531 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | || || || ||||| |||||||||||||| ||||| ||||| ||||||||||| | Sbjct 530 AGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAG 471 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||||||| ||||||||||||| | ||| || || | |||||||| ||| Sbjct 470 ATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGATGGTCTTT 411 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | || |||||||| || ||||| Sbjct 410 CCAGTCAAAGTTTTGACGAAGATTTGCAT 382 >seq3089 Length=958 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || ||||| || | |||||| || ||| | || || ||||| Sbjct 366 CAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTGCCATC 307 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | || || ||||| || |||||||||||||| |||||||| |||||||||||||| Sbjct 306 TTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTGTC 247 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| ||||||||| ||| |||||||||| || ||||| ||||| || ||||| Sbjct 246 TTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGTAATGGT 187 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||| ||||| |||| ||| Sbjct 186 CTTACCGGTTAAGGTCTTAACGAAAATCTACAT 154 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || ||||| |||||||| || || || || || || |||||||| Sbjct 590 ACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCCATCTTCG 531 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | || || || ||||| |||||||||||||| ||||| ||||| ||||||||||| | Sbjct 530 AGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAG 471 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||||||| ||||||||||||| | ||| || || | |||||||| ||| Sbjct 470 ATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGATGGTCTTT 411 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | || |||||||| || ||||| Sbjct 410 CCAGTCAAAGTTTTGACGAAGATTTGCAT 382 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 ||||| || || | || || || ||||| |||||||| || || | ||| || |||||| Sbjct 821 AATACTAAATGCAAGGTTGATTCCTTTTGAATGTTATAGTCAGATAATGTTCTTCCATCT 762 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | || || || ||||| || | ||||| ||| |||||||| || || ||||| ||| Sbjct 761 TCAAGTTGTTTACCAGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCT 702 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| |||||||| ||| |||||||| | || || || || | ||||||||| Sbjct 701 TGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTC 642 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | ||||||||||| || | |||| Sbjct 641 TTGCCAGTCAAAGTCTTGACGAAGATTTACATT 609 >seq14708 Length=579 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||||| || || ||||||| |||||| || || || | ||| || ||||| Sbjct 217 CAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGTTCTTCCATC 158 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||||||| || || |||||||||||||| | ||| || |||||||| ||||| ||||| Sbjct 157 TTCTAACTGTTTACCAGCGAATATGAGTCTCTATTGATCAGGTGGAATACCTTCTTTGTC 98 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 | |||||||| || || ||| ||||| |||| || ||||| |||||||| ||||| Sbjct 97 CTAGATCTTTGCTTTCACATTCTCAATGGTATCTGATGGCTCTACGTCCAAGGTAATGGT 38 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || || ||||| |||| ||| Sbjct 37 CTTTCCAGTAAGAGTTTTAACGAAGATCTACAT 5 Score = 113 bits (124), Expect = 8e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 ||||| || || | || || || || || |||||||| || || | || || |||||| Sbjct 444 AATACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCT 385 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | || || || || || || | ||||| ||| ||||||||||| |||||||| ||| Sbjct 384 TCAAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTATCT 325 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 | || ||||| || || || || ||||| | || || || || || || ||||| Sbjct 324 TAGATTTTTGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATGGTC 265 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || | || || ||||| |||| ||| Sbjct 264 TTTCCAGTTAATGTTTTAACGAAGATCTACAT 233 >seq11541 Length=746 Score = 165 bits (182), Expect = 2e-35 Identities = 165/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||||| || || ||||||| |||||| || || || | ||| || ||||| Sbjct 367 CAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGTTCTTCCATC 308 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||| || || |||||||||||||| | ||| |||||||| ||||| |||||||| Sbjct 307 TTCTAGCTGTTTTCCAGCGAATATGAGTCTCTATTGATCGGGTGGGATGCCCTCCTTGTC 248 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 | |||||| || |||||| || || || |||| | || || || |||||||| || Sbjct 247 CTAAATCTTAGCTTTGACGTTTTCAATTGTATCTGAGGGCTCAACATCTAAGGTGATAGT 188 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || ||||| || || ||||| || | |||| Sbjct 187 TTTGCCAGTGAGTGTTTTAACGAAAATTTACATT 154 Score = 113 bits (124), Expect = 8e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 ||||| || || | || || || || || |||||||| || || | || || |||||| Sbjct 594 AATACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCT 535 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | || || || || || || | ||||| ||| ||||||||||| |||||||| ||| Sbjct 534 TCAAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTATCT 475 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 | || ||||| || || || || ||||| | || || || || || || ||||| Sbjct 474 TAGATTTTTGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATGGTC 415 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || | || || ||||| |||| ||| Sbjct 414 TTTCCAGTTAATGTTTTAACGAAGATCTACAT 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921389183451680