Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq14708 127 2e-24 seq11541 116 3e-21 seq3090 105 6e-18 seq3089 105 6e-18 seq3091 104 2e-17 >seq14708 Length=579 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| || | || |||||| ||||| |||| ||||||||||||| |||||||| || Sbjct 234 ATACCTCCTCTTAATCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCT 175 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | | || || | |||||| | |||||||||||| | ||||| | || ||| || || Sbjct 174 GATAAT-GTTCTTCCATCTTCTAACTGTTTACCAGCGAATATGAGTCTCTATTGATCAGG 116 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||||||||| |||||| ||| | | |||| ||| || | | || Sbjct 115 TGGAATACCTTCTTTGTCCTAGATCTTTGCTTTCACATTCTCAATGGTATCTGATGGCTC 56 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 ||||||| ||| | || || || || |||||||| || || |||| |||| Sbjct 55 TACGTCCAAGGTAATGGTCTTTCCAGTAAGAGTTTTAACGAAGATCTACATG 4 >seq11541 Length=746 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| || | || |||||| ||||| |||| ||||||||||||| |||||||| || Sbjct 384 ATACCTCCTCTTAATCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCT 325 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | | || || | |||||| || ||||| |||||| | ||||| | || ||| || || Sbjct 324 GATAAT-GTTCTTCCATCTTCTAGCTGTTTTCCAGCGAATATGAGTCTCTATTGATCGGG 266 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 || ||||| || ||||| |||||| ||| | | ||||| || || | || || Sbjct 265 TGGGATGCCCTCCTTGTCCTAAATCTTAGCTTTGACGTTTTCAATTGTATCTGAGGGCTC 206 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | |||||||| || || ||||| || ||||| | ||| Sbjct 205 AACATCTAAGGTGATAGTTTTGCCAGTGAGTGTTTTAACGAAAATTTACAT 155 >seq3090 Length=995 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||||||| ||||| || | || || || || | |||||||| ||| Sbjct 383 ATACCACCTCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCG 324 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || | ||||||||||||||| || || ||||||| | ||||| || || Sbjct 323 CTCAAGGTTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGT 264 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||| || | | |||| |||||| | | || Sbjct 263 GGGATGCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCT 204 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 ||||||| || | || || ||||| | || || || ||||||| |||| Sbjct 203 ACGTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATG 153 >seq3089 Length=958 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||||||| ||||| || | || || || || | |||||||| ||| Sbjct 383 ATACCACCTCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCG 324 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || | ||||||||||||||| || || ||||||| | ||||| || || Sbjct 323 CTCAAGGTTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGT 264 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||| || | | |||| |||||| | | || Sbjct 263 GGGATGCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCT 204 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 ||||||| || | || || ||||| | || || || ||||||| |||| Sbjct 203 ACGTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATG 153 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAG 114225 ||| || |||||||| | || ||||| ||||||||||| || || | | || || | Sbjct 825 TCTTAATACTAAATGCAAGGTTGATTCCTTTTGAATGTTATAGTCAGATAAT-GTTCTTC 767 Query 114226 AATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTT 114285 |||||||||||||||||||||| |||| | | | ||| || || || || || || | Sbjct 766 CATCTTCAAGTTGTTTACCAGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCT 707 Query 114286 TGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCA 114345 | || |||||| || | | |||| |||||| | | || || || | ||| | Sbjct 706 TATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGA 647 Query 114346 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||| |||| ||| || || || || | ||| Sbjct 646 TGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACAT 610 >seq3091 Length=1223 Score = 104 bits (114), Expect = 2e-17 Identities = 167/239 (70%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 114145 ATTTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGT 114204 ||||||| |||| || | ||||||||||||| ||| | ||||| || || | |||| Sbjct 389 ATTTACA--TACCTCCTCTAAGTCTCAAAACTAGATGGAGAGTAGACTCCTTCTAGATGT 332 Query 114205 TGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTT 114264 |||||||| | || | |||||| | ||| || |||||| ||||||| | |||| Sbjct 331 TGTAATCGGAGAGGGTTCTGCCATCTTCCAATTGCTTGCCAGCGAAGATGAGTCTTTGTT 272 Query 114265 GGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGG 114324 | || ||||| || ||||| ||||| ||||| || | | |||| |||||| | Sbjct 271 GATCGGGAGGGATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTG 212 Query 114325 TGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 | || ||||||| || | || || ||||| | || || || ||||||| |||| Sbjct 211 ATGGCTCTACGTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATG 153 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | |||||||| ||||| || | || || || || | |||||||| ||| Sbjct 611 ATACCACCTCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCG 552 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || | ||||||||||||||| || || ||||||| | ||||| || || Sbjct 551 CTCAAGGTTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGT 492 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| || || ||||| || | | |||| ||||| | | ||| Sbjct 491 GGGATGCCTTCCTTATCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCTGATGGTTCA 432 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| | || | || ||||| || || || || || || || | ||| Sbjct 431 ACGTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420030742865328