Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq13015 82.4 8e-11 >seq13015 Length=2880 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140 || || |||||| ||| || ||| | | || ||| | ||| ||||| | | || Sbjct 1070 GGCACTAATGGCTACTCTAATGGCTTAATTCCAATGTTAAAGGTTTTCAATGAAACTGCT 1129 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200 | || || ||||| |||||||| | ||||| ||||| || || | ||||| || || Sbjct 1130 AGATATGTTGACCAAGGTGGTGGTAAAAGGAAAGGTTCCTTTGCCATTTATCTAGAACCT 1189 Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260 ||||| || || || | ||| | || ||||||||||| || || | Sbjct 1190 TGGCATGCTGATGTTTTCGATTTTCTTATGATGAAGAAGAACCACGGTAAAGAGGAATAA 1249 Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || ||||| ||||| || ||| | ||||||||||| || |||||||| Sbjct 1250 AGAGCTAGAGATCTCTTTTATGCTTTATGGGTGCCAGATCTATTTATGAA 1299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494598010294240