Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3090 87.8 2e-12 seq3089 87.8 2e-12 >seq3090 Length=995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGT 138460 ||| ||||| || | | |||||||||| | |||||||||||||||| || | || | | Sbjct 366 CAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTGCCA-T 308 Query 138461 CCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGT 138520 | || |||||||| |||| | |||| || | ||||| || || || || ||||| |||| Sbjct 307 CTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTGT 248 Query 138521 CGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 | ||| || || | | || | |||||| | | ||| || || | || | | Sbjct 247 CTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGTAATGG 188 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | ||||| || | || || || ||||||| |||| Sbjct 187 TCTTACCGGTTAAGGTCTTAACGAAAATCTACATG 153 >seq3089 Length=958 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGT 138460 ||| ||||| || | | |||||||||| | |||||||||||||||| || | || | | Sbjct 366 CAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTGCCA-T 308 Query 138461 CCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGT 138520 | || |||||||| |||| | |||| || | ||||| || || || || ||||| |||| Sbjct 307 CTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTGT 248 Query 138521 CGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 | ||| || || | | || | |||||| | | ||| || || | || | | Sbjct 247 CTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGTAATGG 188 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | ||||| || | || || || ||||||| |||| Sbjct 187 TCTTACCGGTTAAGGTCTTAACGAAAATCTACATG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496136820799680