Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3091 105 6e-18 seq3090 105 6e-18 seq14708 91.5 1e-13 seq11541 91.5 1e-13 seq3089 91.5 1e-13 seq3088 82.4 7e-11 >seq3091 Length=1223 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || || | ||| | ||| || ||||| ||||||||||| ||||| ||| | ||| | Sbjct 1055 AGTCTGAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTATAGTCGGATAGAGTTCTT 996 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| |||||||| ||||||||| | ||||||| || || || || || || || || Sbjct 995 CCATCTTCCAATTGCTTTCCTGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCC 936 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 ||||||||||| || |||| || | |||||| || | ||| || || || || Sbjct 935 TTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTG 876 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| || | ||| || || || |||| ||| Sbjct 875 ATGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACAT 838 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || || || |||||||||||||| || || || | ||| | ||| || | ||| Sbjct 813 ATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCCATCTTCGAGTTG 754 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 |||||| ||| | || | || ||| || || || ||||| ||||| || || | || || Sbjct 753 TTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAGATCTT 694 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| ||| | |||||| || | || || || ||||| | || || || || Sbjct 693 GGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGATGGTCTTTCCAGT 634 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | |||||| || || |||||||| Sbjct 633 CAAAGTTTTGACGAAGATTTGCAT 610 >seq3090 Length=995 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || || | ||| | ||| || ||||| ||||||||||| ||||| ||| | ||| | Sbjct 827 AGTCTGAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTATAGTCGGATAGAGTTCTT 768 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| |||||||| ||||||||| | ||||||| || || || || || || || || Sbjct 767 CCATCTTCCAATTGCTTTCCTGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCC 708 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 ||||||||||| || |||| || | |||||| || | ||| || || || || Sbjct 707 TTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTG 648 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| || | ||| || || || |||| ||| Sbjct 647 ATGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACAT 610 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || || || |||||||||||||| || || || | ||| | ||| || | ||| Sbjct 585 ATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCCATCTTCGAGTTG 526 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 |||||| ||| | || | || ||| || || || ||||| ||||| || || | || || Sbjct 525 TTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAGATCTT 466 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| ||| | |||||| || | || || || ||||| | || || || || Sbjct 465 GGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGATGGTCTTTCCAGT 406 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | |||||| || || |||||||| Sbjct 405 CAAAGTTTTGACGAAGATTTGCAT 382 >seq14708 Length=579 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| ||||| ||||||||||| || || ||||| || | ||| | | Sbjct 447 CTTAATACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCA 388 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | | ||||||||| | ||||||| || || || || ||||| ||||| ||| Sbjct 387 TCTTCAAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTA 328 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||| |||||| ||| | ||| | ||||| || | ||| || || | ||||| Sbjct 327 TCTTAGATTTTTGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATG 268 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| ||||| || || || | ||| Sbjct 267 GTCTTTCCAGTTAATGTTTTAACGAAGATCTACAT 233 >seq11541 Length=746 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| ||||| ||||||||||| || || ||||| || | ||| | | Sbjct 597 CTTAATACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCA 538 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | | ||||||||| | ||||||| || || || || ||||| ||||| ||| Sbjct 537 TCTTCAAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTA 478 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||| |||||| ||| | ||| | ||||| || | ||| || || | ||||| Sbjct 477 TCTTAGATTTTTGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATG 418 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| ||||| || || || | ||| Sbjct 417 GTCTTTCCAGTTAATGTTTTAACGAAGATCTACAT 383 >seq3089 Length=958 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| ||||| |||||||||||||| || ||||| || | ||| | | Sbjct 824 CTTAATACTAAATGCAAGGTTGATTCCTTTTGAATGTTATAGTCAGATAATGTTCTTCCA 765 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | |||||| || ||| | ||||||| || || || || || || || || ||| Sbjct 764 TCTTCAAGTTGTTTACCAGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTA 705 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || |||| || | |||||| || | ||| || || || || | Sbjct 704 TCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGATG 645 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || | ||| || || || |||| ||| Sbjct 644 GTCTTGCCAGTCAAAGTCTTGACGAAGATTTACAT 610 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || || || |||||||||||||| || || || | ||| | ||| || | ||| Sbjct 585 ATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCCATCTTCGAGTTG 526 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 |||||| ||| | || | || ||| || || || ||||| ||||| || || | || || Sbjct 525 TTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAGATCTT 466 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| ||| | |||||| || | || || || ||||| | || || || || Sbjct 465 GGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGATGGTCTTTCCAGT 406 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | |||||| || || |||||||| Sbjct 405 CAAAGTTTTGACGAAGATTTGCAT 382 >seq3088 Length=519 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| ||||| ||||||||||| || || ||||| || | ||| | | Sbjct 370 CTTAATACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCA 311 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | | ||||||||| | ||||||| || || || || || ||||| ||||| Sbjct 310 TCTTCAAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGGGATGCCCTCTTTG 251 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 || | ||| || ||| | ||| | || || || | ||| || || | || | Sbjct 250 TCCTAAATCTTAGCTTTCACGTTTTCAATTGTATCTGAGGGCTCAACATCTAAGGTGATA 191 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || || ||||| || ||||||| ||| Sbjct 190 GTTTTGCCAGTGAGTGTTTTAACGAAAATTTACAT 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451888820590240