Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq12968 89.7 6e-13 >seq12968 Length=2778 Score = 89.7 bits (98), Expect = 6e-13 Identities = 173/252 (69%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 127553 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 127612 ||||||||||| ||| |||||| ||||| | || |||||||||| |||||| || Sbjct 484 ATGAGTTCATTACTGAATGTCAGACCAGGCATTAATCCGCGCTTCTTCATCCAGAAGATA 543 Query 127613 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCG 127672 ||||| |||||||| ||||| ||||| || || | | ||||| || | || | ||| Sbjct 544 GCACAGAATGAGCCTGAGAAAAAGATACCTTCAATAGCAGCGAATGCTACTAATCTTTCG 603 Query 127673 GCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATA 127732 ||| |||| | || | | ||| || | ||||| | |||||||| | | | Sbjct 604 GCATAGGA---ATTATCTGAGCCTATCCATTTTAAGGCCCATTCGGCCTTTTTAGCAACA 660 Query 127733 CATGGGACGGTCTG-GATCGCTTCAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTA 127791 | ||| || || ||| |||| ||| || | || ||| ||||||| ||||||| Sbjct 661 -ACCGGAATGTTTGTGATTGCTTTAAAAAGGAAGTCTTTATCTTATGGATCAGTGATGTA 719 Query 127792 CTTATCTATGAG 127803 |||| ||||| Sbjct 720 GGTATCAATGAG 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613351952003040