Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq13015 149 7e-31 >seq13015 Length=2880 Score = 149 bits (164), Expect = 7e-31 Identities = 821/1297 (63%), Gaps = 20/1297 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||| || || ||||||||||||||| ||||||| || || || ||||||| || || Sbjct 2160 TAGACATTGGTGGTGTAGGGTTCAAAGGATTCATTGTTCCCTAATATTTGTGAAGTTGAT 2101 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGA-TGCGTTC 106053 || |||||||| || || | | ||| |||||| ||| | || | | | | | | Sbjct 2100 GCAGTTGGCATAGGAGCAACTAGGAGAGAGTTACGGGCACCGTGTTACATAACTTCCTAT 2041 Query 106054 CTTGAGAACATCCCAGTCGTAG-TTG-AGCTTG-GTTTCACCTTCCCACATATCAAATT- 106109 ||| || | ||| || || ||| || | | ||| | | ||| | |||||||| Sbjct 2040 CTT-AGTGTTTACCAATCATACCTTGTAGTATAAGGTTCTTCATTCCATAGATCAAATTA 1982 Query 106110 GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169 ||| || || |||| |||||| | ||||| ||||| | || | ||| || Sbjct 1981 GAATTTTCCTTTACTGAGTGG-AGAACCTTAGAATGTTTCATAAGGGCCCTCTTCTTTAG 1923 Query 106170 CCAATTCACAGCTCGCCTCCAGG---GATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 | | || | | | || || || || ||||| ||||| ||||| || | Sbjct 1922 CTAGTTGAA---TTGATTCAAGCATCGAAGCATGATAAATGGTCTCAAATATCTTCTTGT 1866 Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATAC-ATCCGCG 106285 ||| || ||||||||||| |||||||| | || || || | | ||| || Sbjct 1865 TCAAATCAGCAGCTTCATCTGATTCAAATGCAAATTT-CAGTAATTAGAAAGTATCAGCT 1807 Query 106286 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 106345 || || | |||||| | ||||||||||||||| || | |||||| ||| || || Sbjct 1806 AGTCCCTAAACACCTATACCAATAGGTCTGTGACGGAGATTAGATTTTTCGGCTTCTTCT 1747 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 || || || || || ||||||| ||||| ||| || | | || | | Sbjct 1746 ACTGGGTAGAAGTTGACATCAATGATCTTGTTTAAATTGCGAGTTATTACACGAGTCACT 1687 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465 ||||| ||| ||||||||||||| || | |||| || ||||| | ||||| | Sbjct 1686 TCATGGAGTCTTTCATAATCAAAGGTCTACGATTCTTTGTTCACATATCTAGGAAGAGAT 1627 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 ||||| || | ||| |||||||| | ||||| |||||| || | ||||| Sbjct 1626 ATTGAGGCGAGATTACAAACAGCAATTTCATCTGGGGATGTGTATTCGACTATTTCACAG 1567 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 || | |||||| || || || || |||| || || ||| ||||| ||||||||| Sbjct 1566 CAAAGGTTGGATGATTTTATTGTACCTAAATGCTATTAGTTTGATTTTTTATTGCACGCA 1507 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645 || || ||||||||||| || || || || || || || | | ||| || | ||| Sbjct 1506 TCTTTATAGAGCATGTATGGAGTGCCAGTTTCTTGTTGAGATTCAATAATAGCTTCCCAA 1447 Query 106646 ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 106705 | | |||| | || ||| || || || ||| |||||| || || Sbjct 1446 AGTTTTTAGGCTTTGATAACTTTTTTGCCCTTGCCTTCTTTCTCATACTTTTCATAAAGC 1387 Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765 |||||| ||||| || | | || | || ||||||| | ||||||||||| Sbjct 1386 TTTTCAAATTCCTCTCCAAAAACATCTTGTAAGCCGGGTGCCTCATTAGGACAGAAAAGT 1327 Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 106825 | ||| | ||| || || | ||||| || || ||||| | ||| | | || Sbjct 1326 GTCCAATCTCCATTAGACTTCACTCTATTCATAAATAGATCTGGCACCCATAAAGCATAA 1267 Query 106826 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTC 106884 |||||||||||| | || || | ||| ||||| || | | | ||| || || Sbjct 1266 AAGAGATCTCTAGCTCTTTATTCCTCTTTACCGTGGTT-CTTCTTCATCATAAGAAAATC 1208 Query 106885 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC---CTTTCGACGCCC 106941 | | ||| || ||||| || || ||||| | || | || || | || || || Sbjct 1207 GAAAACATCAGCATGCCAAGGTTCTAGATAAATGGCAAAGGAACCTTTCCTTTTACCACC 1148 Query 106942 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 107001 | |||| | ||||| | || || | || || || | ||||||||| | |||| Sbjct 1147 ACCTTGGTCAACATATCTAGCAGTTTCATTGAAAACCTTTAACATTGGAATTAAGCCATT 1088 Query 107002 TGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 107061 || | ||||| || || |||| ||| ||||| | | ||| || | Sbjct 1087 AGAGTAGCCATTAGTGCCTTTAATATAAGAGCCTGAAGCTCTTATACAATGAATTGAAAG 1028 Query 107062 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 107121 ||||| || ||||| |||| || ||| ||| | ||||||| | |||||||| Sbjct 1027 TCCAATTCCACCAGCTGACTTAGATATTAAAGCAGTTTGTCTAAGAGTATCGTAGATACC 968 Query 107122 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 107181 | ||||| || || || | | | |||||| || ||||| | || | ||||| Sbjct 967 TTGTATTGAATCGTCTTTCATAGTCAAAAGGAAACATGAAGACATTTATGGCTTGGGTGT 908 Query 107182 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAAC 107218 ||||| ||||| | || || || || ||| | ||| Sbjct 907 ACCAGAGTTGAATAAAGTAGGAGTGGCATGAGTAAAC 871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589831505358560