Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq6046 143 3e-29 >seq6046 Length=3440 Score = 143 bits (158), Expect = 3e-29 Identities = 327/483 (68%), Gaps = 18/483 (4%) Strand=Plus/Plus Query 154630 AACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCA-- 154687 ||||||| | ||| || | || |||| ||| || || | ||||| || ||||| Sbjct 2171 AACCTAATTCTGGAGCAAATGGAGAGTTTGCTGGCATGATGGCAATAAAATATTACCACG 2230 Query 154688 --TCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 154745 |||||| || | | | ||| || | ||| | || |||| ||||| ||||| Sbjct 2231 AGTCAAGG----GGTCAAGGCCACAGAGATATCTGTCTTATTCCAGTTTCAGCTCATGGC 2286 Query 154746 ACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGT-GA-TG 154803 ||||| || || | |||| |||| || ||||||||||| | ||| || || || || Sbjct 2287 ACTAACCCAGCCACTGCTTCAATGGTTGGAATGAAAGTTGTGGCTGTTAACTGCAGAGTG 2346 Query 154804 ATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT--TGA 154861 | | ||| | || || | | ||| || || ||| ||| |||||||| | | | Sbjct 2347 A--ACGGTGATATCGATGTGGAGGATTTAAAGGCGAAGGCA--CATGAATATAAAGATAA 2402 Query 154862 ACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAG 154921 ||| ||||| ||||||||| |||||| ||| ||||||||||||||| ||| Sbjct 2403 ACTTTCATGCGCTATGATTACTTACCCAAGTACTCATGGTGTATTTGAAGGAGGAGTTAA 2462 Query 154922 ACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCT 154981 |||| ||| | | || ||| | ||||||| || | ||| | ||||| || || | Sbjct 2463 GGAGATTTGTGAAGTTGTACATAAATATGGTGGATAGATCTATTTAGATGGTGCCAACTT 2522 Query 154982 AAATGCACAGGTAGGACTAGCAAAACCATGTGAGTAT-GGTGCAGATGTATGTCATCTAA 155040 |||||||| | ||||| | |||| | | ||| || || ||||| |||| | | Sbjct 2523 TAATGCACAAATGGGACTTACTTCACCAGGA-ATTATCGGCGCTGATGTTGGTCACTTTA 2581 Query 155041 ACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAG 155100 || ||||||| ||||| | ||| || ||||||||||| || ||||| || || | || | Sbjct 2582 ACCTACATAAGACATTTTCTATACCTCATGGAGGTGGTGGACCTGGAGTTGGAGCCATTG 2641 Query 155101 GTG 155103 ||| Sbjct 2642 GTG 2644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579066230200960