Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3091 167 5e-36 seq3090 167 5e-36 seq3089 167 5e-36 seq14708 123 6e-23 seq13015 93.3 9e-14 >seq3091 Length=1223 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | || ||||| ||||| ||||| |||||||| || ||||| Sbjct 831 TCTCAATCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGT 772 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||||||||| || || || ||||| || |||| |||||| || || ||||| || Sbjct 771 TCTTCCATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACC 712 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| | || || ||||||||| || |||||||| || ||| || ||||| Sbjct 711 TTCCTTGTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAG 652 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | |||||||| ||||||||||| ||||| | |||||| Sbjct 651 AGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 610 Score = 163 bits (180), Expect = 6e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| || || ||||| ||||| || | || |||||||||| || || Sbjct 375 TCTAAGTCTCAAAACTAGATGGAGAGTAGACTCCTTCTAGATGTTGTAATCGGAGAGGGT 316 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||| || |||||||| |||| |||||| || ||||| || || Sbjct 315 TCTGCCATCTTCCAATTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGAGGGATACC 256 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || ||||||||||||||||||||| || || || || | Sbjct 255 TTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAA 196 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||| ||||| || || || || || ||||| Sbjct 195 TGTAATGGTCTTACCGGTTAAGGTCTTAACGAA 163 Score = 154 bits (170), Expect = 3e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | || ||||| ||||| ||||| || || || |||| ||||| Sbjct 1059 TCTTAGTCTGAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTATAGTCGGATAGAGT 1000 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||| ||||||||||| | || || ||| || || || || || Sbjct 999 TCTTCCATCTTCCAATTGCTTTCCTGCGAAGATCAATCTTTATTGATCGGGTGGGATACC 940 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || || |||||||| || |||||| |||||||||||||| || || || ||||| Sbjct 939 CTCCTTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAG 880 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || |||||||| || ||||| | || |||| Sbjct 879 GGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACATT 837 Score = 134 bits (148), Expect = 3e-26 Identities = 165/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 |||||||||||| || | ||| || || ||||| || | || ||||| ||| |||| | Sbjct 603 TCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAG-G 545 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| || || || || || ||||| |||| |||||| || || || |||| Sbjct 544 TTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGC 485 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| || ||||| || || ||| ||||||||||| ||||| || ||| || || | Sbjct 484 CTTCCTTATCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCTGATGGTTCAACGTCGA 425 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | ||||| || || | || || ||||| | || ||| Sbjct 424 GAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 382 >seq3090 Length=995 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | || ||||| ||||| ||||| |||||||| || ||||| Sbjct 603 TCTCAATCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGT 544 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||||||||| || || || ||||| || |||| |||||| || || ||||| || Sbjct 543 TCTTCCATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACC 484 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| | || || ||||||||| || |||||||| || ||| || ||||| Sbjct 483 TTCCTTGTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAG 424 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | |||||||| ||||||||||| ||||| | |||||| Sbjct 423 AGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 382 Score = 154 bits (170), Expect = 3e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | || ||||| ||||| ||||| || || || |||| ||||| Sbjct 831 TCTTAGTCTGAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTATAGTCGGATAGAGT 772 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||| ||||||||||| | || || ||| || || || || || Sbjct 771 TCTTCCATCTTCCAATTGCTTTCCTGCGAAGATCAATCTTTATTGATCGGGTGGGATACC 712 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || || |||||||| || |||||| |||||||||||||| || || || ||||| Sbjct 711 CTCCTTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAG 652 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || |||||||| || ||||| | || |||| Sbjct 651 GGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACATT 609 Score = 145 bits (160), Expect = 2e-29 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 |||||||||||| || | ||| || || ||||| || | || ||||| ||| |||| | Sbjct 375 TCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAG-G 317 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| || || || || || ||||| |||| |||||| || || || |||| Sbjct 316 TTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGC 257 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| |||||||| || || ||||||||||||||||||||| || || || || | Sbjct 256 CTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCA 197 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||| ||||| || || || || || ||||| Sbjct 196 ATGTAATGGTCTTACCGGTTAAGGTCTTAACGAA 163 >seq3089 Length=958 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | || ||||| ||||| ||||| |||||||| || ||||| Sbjct 603 TCTCAATCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGT 544 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||||||||| || || || ||||| || |||| |||||| || || ||||| || Sbjct 543 TCTTCCATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACC 484 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| | || || ||||||||| || |||||||| || ||| || ||||| Sbjct 483 TTCCTTGTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAG 424 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | |||||||| ||||||||||| ||||| | |||||| Sbjct 423 AGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 382 Score = 145 bits (160), Expect = 2e-29 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 |||||||||||| || | ||| || || ||||| || | || ||||| ||| |||| | Sbjct 375 TCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAG-G 317 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| || || || || || ||||| |||| |||||| || || || |||| Sbjct 316 TTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGC 257 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| |||||||| || || ||||||||||||||||||||| || || || || | Sbjct 256 CTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCA 197 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||| ||||| || || || || || ||||| Sbjct 196 ATGTAATGGTCTTACCGGTTAAGGTCTTAACGAA 163 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || || |||||||| || || || | | ||||| |||||||| || || ||||| Sbjct 806 GTTGATTCCTTTTGAATGTTATAGTCAGATAATGTTCTTCCATCTTCAAGTTGTTTACCA 747 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | || || ||| || || || || || || || |||||||| || |||| Sbjct 746 GCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTTGAATCTTGGCCTTG 687 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || |||||||||||||| || || || |||||||| | ||||| || |||||||| Sbjct 686 ACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTCTTGCCAGTCAAAGTC 627 Query 195124 TTTACGAACACTTGCATT 195141 || ||||| | || |||| Sbjct 626 TTGACGAAGATTTACATT 609 >seq14708 Length=579 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| | || || ||||||| || ||||| || | | || Sbjct 226 TCTTAATCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGT 167 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||| ||||| ||||| || |||| | ||| || || ||||| || Sbjct 166 TCTTCCATCTTCTAACTGTTTACCAGCGAATATGAGTCTCTATTGATCAGGTGGAATACC 107 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| | || ||| || || ||||||||||| || || || || || | Sbjct 106 TTCTTTGTCCTAGATCTTTGCTTTCACATTCTCAATGGTATCTGATGGCTCTACGTCCAA 47 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||| |||||||| || | |||||| ||||| Sbjct 46 GGTAATGGTCTTTCCAGTAAGAGTTTTAACGAA 14 >seq13015 Length=2880 Score = 93.3 bits (102), Expect = 9e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 160574 AGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAA 160633 ||||| ||||| | || || || | ||| | ||||| || ||||| |||||||| Sbjct 1250 AGAGCTAGAGATCTCTTTTATGCTTTATGGGTGCCAGATCTATTTATGAATAGAGTGAAG 1309 Query 160634 GACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTAT 160693 ||||| ||||||| ||||||||||| ||||| || || || | | ||||||| | Sbjct 1310 TCTAATGGAGATTGGACACTTTTCTGTCCTAATGAGGCACCCGGCTTACAAGATGTTTTT 1369 Query 160694 GGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTC 160753 || || || || | |||||||||| || || ||||| || | | |||||| || Sbjct 1370 GGAGAGGAATTTGAAAAGCTTTATGAAAAGTATGAGAAAGAAGGCAAGGGCAAAAAAGTT 1429 Query 160754 GTGAAGGCCCAAGAACTGTGG 160774 | || ||| || |||| ||| Sbjct 1430 ATCAAAGCCTAAAAACTTTGG 1450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109193826823148