Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq4398 159 3e-33 seq12486 123 2e-22 seq17346 111 1e-18 seq14708 111 1e-18 seq11541 111 1e-18 seq3091 109 4e-18 seq3090 109 4e-18 seq3089 109 4e-18 seq13015 105 5e-17 seq3088 105 5e-17 seq5058 104 2e-16 seq6871 86.0 5e-11 >seq4398 Length=2235 Score = 159 bits (176), Expect = 3e-33 Identities = 405/606 (67%), Gaps = 20/606 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || || |||||||| || || || || || ||||| ||| |||||| ||| Sbjct 176 AGCAATCGGAATCGATTTAGGTACAACCTACTCATGCGTAGGTGTATGGTAAAATGATAA 235 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| |||||||| | |||||||||||||||| || || ||||| |||||| | ||||| Sbjct 236 AGTAGAAATTATCCCAAATGATCAAGGTAACAACACCACACCATCATATGTTGCATTCAC 295 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| || | | || | |||||||| || || |||||| | | || || | || Sbjct 296 TGAAGAGGAGCGTCTAATCGGTGATGCCGCTAAGAATCAAGTTGCAAGAAACCCCAAGAA 355 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | | |||||| || | || || || |||| || | ||| | || || | Sbjct 356 CACTGTCTATGATGCAAAGAGATTGATCGGTAGAAAATTCACTGAGAAGCAAGTACAAGA 415 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGA---AAACC--TTATATT 550285 || | ||||| ||||| ||| | ||| | | | ||| || || |||| | Sbjct 416 GGACTTAAAGCACTGGCCATTCAAGGTTGAGGCAGGTGCAGGAGACAAGCCAGTTATCGT 475 Query 550286 GAAGC--TACTCATGAAGGATCTGTTAAACAA-TTTTCACCAGAACAAATTTCATCTATG 550342 || ||| |||| | || || || || | | || |||| || || ||| Sbjct 476 TGTGCAGTAC-----AAGGGTGAGTCGAAGAAGTTCTAGGCTGAGGAAATCTCCTCCATG 530 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAG-AAGTTACGGATGC 550401 || || | || ||||| ||| || || | | || |||| | ||| |||| Sbjct 531 GTCCTAGTAAAGATGAAGGAAATTGCTGAGGCATATCTT-TCCAAGCCAATTAAAAATGC 589 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || || ||||| || || ||||| ||||||||| | | ||||||||||| |||||||| Sbjct 590 TGTTATCACTGTGCCCGCTTATTTCAATGACTCATAGAGACAAGCTACTAAGGATGCTGG 649 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 ||| |||| | || ||||| ||||| || ||||| || || ||||| ||| |||| Sbjct 650 TACCATTTCTGGTATGAACGTTCTCCGTATCATTAATGAGCCCACAGCTGCCGCAATTGC 709 Query 550522 ATATGGACTTGATAA-ACATAATGATCAAGAACTTAATGTACTCATCTTTGATT---GTG 550577 || || | || || | || || || |||| ||||| ||||| ||||||| ||| Sbjct 710 CTACGGTTTAGACAAGAAATCATCAT-AAGAGAAGAATGTGCTCATTTTTGATTTAGGTG 768 Query 550578 GAGGTA 550583 | |||| Sbjct 769 GTGGTA 774 Score = 154 bits (170), Expect = 1e-31 Identities = 395/595 (66%), Gaps = 10/595 (2%) Strand=Plus/Plus Query 552009 ATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCA 552068 ||||| || || || || || || |||| |||||||| ||||| || ||| Sbjct 1053 ATTTCAAGAGCTAAGTTCGAGGAACTTTGCATGGATCTCTTCAGAAAGTGCATGCCCCCA 1112 Query 552069 GTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATC---CAAAGTACATGAAATTGTG 552125 |||||| | || || | || ||| | | || || |||| | || ||| |||| Sbjct 1113 GTAGAAAACGTATTGAAGGACTCA--GGTCTATCAAAGGGTCAAATT-CACGAAGTTGTA 1169 Query 552126 CTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCA 552183 || || ||||| || || | ||||| || ||| |||| | ||| ||| || || Sbjct 1170 CTCGTCGGTGGTTCAACCCGTATTCCCAAGGTTCAAACAATGCTCCAAGA-CTTCTT-CA 1227 Query 552184 ATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAA 552243 |||| || |||| ||| | | ||||||||||||||||| || || ||||| ||| Sbjct 1228 ATGGCAAGCAATTGAATAGATCAATCAATCCAGATGAGGCTGTCGCATACGGTGCTGCAG 1287 Query 552244 TTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAG 552303 | ||||| || || | |||| | |||| |||| | | || | || | | | Sbjct 1288 TCCAAGCTGCCATCTTAACTGGCGAGGGTGATCAAAACGTGAAGGATCTCTTATTGTTGG 1347 Query 552304 ATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCG 552363 ||||| |||| ||||| || ||| | || || | ||| ||| | ||||| ||||| || Sbjct 1348 ATGTTGCTCCACTATCGCTCGGTATCGAGACTGCTGGCGGTGTGATGACCAATCTCATTC 1407 Query 552364 ATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATC 552423 ||||| || || ||||| || || || | || | || ||| | ||||| Sbjct 1408 CAAGAAACACCACCATTCCAACCAAGAAGTCATAGATCTTCACCACTTATGCTGATAACT 1467 Query 552424 AAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATC 552483 || | | || |||||| | |||||||| || ||| |||| || || || || ||| Sbjct 1468 AACCAGGCGTGCTCATTCAAGTATTTGAAGGTGAGAGACAATTGACCAAGGACAACCATC 1527 Query 552484 AACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTG 552543 || || | || || || || ||||| || || || || | || || || | |||| Sbjct 1528 TCCTCGGCAAATTCAACTTGGAGGGTATCCCACCCGCACCAAGAGGCGTCCCATAGATTG 1587 Query 552544 AAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||| || |||||||| |||||||| || || ||||||||| | ||| ||| || Sbjct 1588 AAGTCACCTTCGATATTGATGCCAACGGTATCTTGAATGTGTCAGCTGTTGACAA 1642 >seq12486 Length=3878 Score = 123 bits (136), Expect = 2e-22 Identities = 279/414 (67%), Gaps = 14/414 (3%) Strand=Plus/Minus Query 368539 AATATTGGAACAAAACATTTTGATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCA 368598 ||||| ||| || | ||| |||||||||| | || | |||||||| ||||| Sbjct 2259 AATATAGGAG--AAGCGTTTCCATAATTGGCTTAAGGATGCCAAGGATTGGTGCTTTTCA 2202 Query 368599 AGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATT 368658 |||| ||| | |||||||| ||| || || ||||| |||||| || |||||| Sbjct 2201 AGAAATAGATATTGGGGAAATCCTATCCCTTTATGGGTCAGTGATGACATGGAGGAAATT 2142 Query 368659 GTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGG-TGTGCA--AAATATTAGT 368715 ||||| || || |||||| ||||||| | ||||||||||| | || | | || | | Sbjct 2141 GTTTGCATTGGATCAATTTAAGAATTAAAGGAATTATCTGGCTTTGAAGGAGATGTCACA 2082 Query 368716 GATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTA 368775 ||||| || | || | || || || | ||||| || || |||| || || || Sbjct 2081 GATTTGCACAGAGAATCTGTAGACCATATCACCATTCCTTCCAAATAAGGCAAGGGAGTA 2022 Query 368776 TTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGT 368835 || || || | ||| || ||||||||||||||||| || || ||||| | | | Sbjct 2021 TTAAAGAGAATTCCTGAAGTATTTGATTGCTGGTTTGAATCTGGCTCAATGCCATTCGCT 1962 Query 368836 CAAATACATTATCCATTTGA---TAACGCAAAATACTTTGATAATGATAAAGATTATGTG 368892 | || || || |||||||| || | | || | ||| | |||||| ||| Sbjct 1961 TAGATTCACTACCCATTTGATGTTAGTGAAGAAGAATTT-----TAGTAAAGA-TATCCT 1908 Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTA 368946 || |||||| | | ||| | ||||||| || ||||| ||||| || || ||| Sbjct 1907 GCAGATTTTATTGCTGAAGGACTTGATCAGACTCGTGGCTGGTTCTACACACTA 1854 >seq17346 Length=8683 Score = 111 bits (122), Expect = 1e-18 Identities = 210/307 (68%), Gaps = 4/307 (1%) Strand=Plus/Minus Query 344266 ACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAACTTCCATTCTT 344325 ||||| || || || | | ||| | || || |||| |||||| |||||||| | | Sbjct 6762 ACCATATGCTTTAGTCTCTAATAGAAAGTGGGCCCAAAGAATATCATAACTTCCTATTTC 6703 Query 344326 TGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGTCCTAAAGCTACT 344385 | || || | ||||||||||||| ||||||||| || || || ||||| | | | Sbjct 6702 TTACCAGTAAATCCATTATACATTACTTCATTTCCATATCTTTAATAACCTAATG--AAT 6645 Query 344386 AAA--TCATCATTAATTTTATTAATATTAACTCCTGTAAATGGAGTTGCATCTCCATATA 344443 || |||| ||| | || || ||| |||| |||||| |||||||| || | Sbjct 6644 GAAGTTCATTTGAAATGTCATCAACATTTTGTCCTTAAAATGGTGTTGCATCACCTTCAC 6585 Query 344444 CCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACCTATCGTCATAC 344503 || |||| | | |||||| |||||| || |||||||| ||||| || ||||| | Sbjct 6584 TTCCATTAAAGGAAGCTACTTTAGATAGTAAGCACTCAATTAAATGACCAATAGTCATTC 6525 Query 344504 GTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTGATTTTGTGAATG 344563 | || ||| || |||||||| ||| || ||||| | | ||| | | || |||| Sbjct 6524 GAGAAGGAATAGCATGAGGATTAACAATCATGTCAGGTACACACCCTTCTCTAGTAAATG 6465 Query 344564 GAAGATC 344570 ||||||| Sbjct 6464 GAAGATC 6458 >seq14708 Length=579 Score = 111 bits (122), Expect = 1e-18 Identities = 137/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| || || |||| || ||||||| ||||||||| | |||||| ||||| || | ||| Sbjct 415 AATGTTATAGTCAGATAAAGTTCTTCCATCTTCAAGCTATTTTCCTGCAAAGATCAATCT 356 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || ||||| || ||||| ||||| ||||||| |||||| ||| || |||||||| Sbjct 355 TTATTGATCGGGTGGAATACCTTCCTTATCTTAGATTTTTGCTTTAACATTTTCAATTGT 296 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 |||| || |||| | | ||||| || || ||||| | ||||||||||| || | Sbjct 295 GTCAGATGGCTCAACAT-CTAAAGTAATGGTCTTTCCAGTTAATGTTTTAACGAAGATCT 237 Query 563471 GCATA 563475 |||| Sbjct 236 ACATA 232 Score = 98.7 bits (108), Expect = 8e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||| || | || |||||| |||||| | ||||| || || || || ||||| Sbjct 186 ATGTTGTAGTCTGATAATGTTCTTCCATCTTCTAACTGTTTACCAGCGAATATGAGTCTC 127 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 | |||||||| ||||| |||||||| || | || ||| ||| || |||||| ||| Sbjct 126 TATTGATCAGGTGGAATACCTTCTTTGTCCTAGATCTTTGCTTTCACATTCTCAATGGTA 67 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | || ||| | | || |||| || || |||||||||||||||||||| || | Sbjct 66 TCTGATGGCTCTACGTCCAAG-GTAATGGTCTTTCCAGTAAGAGTTTTAACGAAGATCTA 8 Query 563472 CAT 563474 ||| Sbjct 7 CAT 5 >seq11541 Length=746 Score = 111 bits (122), Expect = 1e-18 Identities = 137/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| || || |||| || ||||||| ||||||||| | |||||| ||||| || | ||| Sbjct 565 AATGTTATAGTCAGATAAAGTTCTTCCATCTTCAAGCTATTTTCCTGCAAAGATCAATCT 506 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || ||||| || ||||| ||||| ||||||| |||||| ||| || |||||||| Sbjct 505 TTATTGATCGGGTGGAATACCTTCCTTATCTTAGATTTTTGCTTTAACATTTTCAATTGT 446 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 |||| || |||| | | ||||| || || ||||| | ||||||||||| || | Sbjct 445 GTCAGATGGCTCAACAT-CTAAAGTAATGGTCTTTCCAGTTAATGTTTTAACGAAGATCT 387 Query 563471 GCATA 563475 |||| Sbjct 386 ACATA 382 Score = 89.7 bits (98), Expect = 4e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||| || | || |||||| |||||| || |||||||| || || || ||||| Sbjct 336 ATGTTGTAGTCTGATAATGTTCTTCCATCTTCTAGCTGTTTTCCAGCGAATATGAGTCTC 277 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 | ||||| || || || || || || || | ||| || ||| || ||||||||| Sbjct 276 TATTGATCGGGTGGGATGCCCTCCTTGTCCTAAATCTTAGCTTTGACGTTTTCAATTGTA 217 Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472 || | | | | || | || | |||||| ||||| || |||||||||||||||| | Sbjct 216 TCTGAGGGCTCAACATCTAAGGTGATAGTTTTGCCAGTGAGTGTTTTAACGAAAATTTAC 157 Query 563473 AT 563474 || Sbjct 156 AT 155 >seq3091 Length=1223 Score = 109 bits (120), Expect = 4e-18 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| |||||||| ||| |||||||||| |||||| ||||||||||| || ||||| Sbjct 796 TTTGG--ATATTGTAGTCACTTAGAGTTCTTCCATCTTCGAGTTGTTTTCCAGCGAAAAT 739 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 |||||||| ||||| || ||||| ||||| || || | || || || || || Sbjct 738 GAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAGATCTTGGCCTTGACGTTTTC 679 Query 563406 AATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACG 563463 || || || || | || || || ||||| | || || ||||| | |||||| ||| Sbjct 678 GATGGTGTC--TGAGGGTTCAACATCAAGAGTGATGGTCTTTCCAGTCAAAGTTTTGACG 621 Query 563464 AAAATTTGCATA 563475 || ||||||||| Sbjct 620 AAGATTTGCATA 609 Score = 107 bits (118), Expect = 2e-17 Identities = 125/167 (75%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 ||||| |||||||||||||||||||||||| || |||||||| ||||| || || || Sbjct 545 GTTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATG 486 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TT 563428 ||||| |||||||| || || || || |||||| || || || || || | Sbjct 485 CCTTCCTTATCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTC--TGATGGTTCAACGT 428 Query 563429 CGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||||| | || || ||||| || || |||||||| |||| |||| Sbjct 427 CGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACATA 381 >seq3090 Length=995 Score = 109 bits (120), Expect = 4e-18 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| |||||||| ||| |||||||||| |||||| ||||||||||| || ||||| Sbjct 568 TTTGG--ATATTGTAGTCACTTAGAGTTCTTCCATCTTCGAGTTGTTTTCCAGCGAAAAT 511 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 |||||||| ||||| || ||||| ||||| || || | || || || || || Sbjct 510 GAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAGATCTTGGCCTTGACGTTTTC 451 Query 563406 AATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACG 563463 || || || || | || || || ||||| | || || ||||| | |||||| ||| Sbjct 450 GATGGTGTC--TGAGGGTTCAACATCAAGAGTGATGGTCTTTCCAGTCAAAGTTTTGACG 393 Query 563464 AAAATTTGCATA 563475 || ||||||||| Sbjct 392 AAGATTTGCATA 381 Score = 87.8 bits (96), Expect = 1e-11 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 ||||| |||||||||||||||||||||||| || |||||||| ||||| || || || Sbjct 317 GTTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATG 258 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTC 563429 ||||| || ||||| || || || || |||||| || || | || ||| || Sbjct 257 CCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTAC-GTC 199 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||| || ||||| || | || ||||||||||| | ||| Sbjct 198 CAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACAT 154 >seq3089 Length=958 Score = 109 bits (120), Expect = 4e-18 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| |||||||| ||| |||||||||| |||||| ||||||||||| || ||||| Sbjct 568 TTTGG--ATATTGTAGTCACTTAGAGTTCTTCCATCTTCGAGTTGTTTTCCAGCGAAAAT 511 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 |||||||| ||||| || ||||| ||||| || || | || || || || || Sbjct 510 GAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAGATCTTGGCCTTGACGTTTTC 451 Query 563406 AATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACG 563463 || || || || | || || || ||||| | || || ||||| | |||||| ||| Sbjct 450 GATGGTGTC--TGAGGGTTCAACATCAAGAGTGATGGTCTTTCCAGTCAAAGTTTTGACG 393 Query 563464 AAAATTTGCATA 563475 || ||||||||| Sbjct 392 AAGATTTGCATA 381 Score = 89.7 bits (98), Expect = 4e-12 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 563265 TACAAGATG-AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||| | ||| |||| | || |||| | ||| || || |||| || |||||| ||||| Sbjct 819 TACTAAATGCAAGGTTGATTCCTTTTG-AATGTTATAGTCAGATAATGTTCTTCCATCTT 761 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 |||||||||| || || || || | ||||| ||||| || || || || || ||||||| Sbjct 760 CAAGTTGTTTACCAGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTT 701 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTT 563442 |||| || || || |||||| || |||| || ||| || || || | || Sbjct 700 GAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACA-TCAAGGGTGATGGTC 642 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||||| | ||| || ||||| |||| ||| Sbjct 641 TTGCCAGTCAAAGTCTTGACGAAGATTTACAT 610 Score = 87.8 bits (96), Expect = 1e-11 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 ||||| |||||||||||||||||||||||| || |||||||| ||||| || || || Sbjct 317 GTTCTGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATG 258 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTC 563429 ||||| || ||||| || || || || |||||| || || | || ||| || Sbjct 257 CCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTAC-GTC 199 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||| || ||||| || | || ||||||||||| | ||| Sbjct 198 CAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACAT 154 >seq13015 Length=2880 Score = 105 bits (116), Expect = 5e-17 Identities = 298/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 684506 ATTCCATAAATCAAATTGGAATTTTCCTTTGGAAAGAGGACTTCCTATAAATGTTTCATA 684565 |||||||| |||||||| |||||||||||| || ||| ||| ||||||||||| Sbjct 1999 ATTCCATAGATCAAATTAGAATTTTCCTTTACTGAGTGGAGAACCTTAGAATGTTTCATA 1940 Query 684566 AGCACCAAATTCTTTGGATAATTTCATTGATTCTTCCAGACAACCAAAATAAATAGTTTC 684625 || || |||||| | || || |||||||| || || || |||||| || || Sbjct 1939 AGGGCCCTCTTCTTTAGCTAGTTGAATTGATTCAAGCATCGAAGCATGATAAATGGTCTC 1880 Query 684626 AAATATTTTACGATTGAGATCGCGAGCCAATTCAGAATCAAATGGTGTTTTAA--AAATC 684683 |||||| || || | ||| ||| || || ||||||| ||| | || | Sbjct 1879 AAATATCTTCTTGTTCAAATCAGCAGCTTCATCTGATTCAAATGCAAATTTCAGTAATTA 1820 Query 684684 GCAAAAACATCCGCTACTCCTTGGACACCAACACCAATTGGCCTATGTTTAATATTAGAT 684743 | ||| ||| |||| ||| | ||||| | |||||| || || || | ||||||| Sbjct 1819 G--AAAGTATCAGCTAGTCCCTAAACACCTATACCAATAGGTCTGTGACGGAGATTAGAT 1762 Query 684744 ACACGTGTTTTATCAACTGGATAAAAATTAATATCAATAACATTATTAAGATTTCTTGTC 684803 | || || ||||| || || || | |||||| | || || | ||| | || Sbjct 1761 TTTTCGGCTTCTTCTACTGGGTAGAAGTTGACATCAATGATCTTGTTTAAATTGCGAGTT 1702 Query 684804 ATAATTCCTGACACTTTCCGTAACATATCATAATCGAATTCTGGTACTCCATTTTTATGT 684863 || | | | ||||| | | | |||||||| || ||| || | || | ||| Sbjct 1701 ATTACACGAGTCACTTCATGGAGTCTTTCATAATCAAA----GGT-CTACGATTCTTTGT 1647 Query 684864 ATTATGAATCTGGGAAGACATATTGATGACAAATTACAAGTGGCATATTCATCCGCTGAT 684923 | | |||| |||||| ||||||| | | ||||||| ||| |||||| | ||| Sbjct 1646 -TCACATATCTAGGAAGAGATATTGAGGCGAGATTACAAACAGCAATTTCATCTGGGGAT 1588 Query 684924 GAGTATTCTACAATTTCCGAACAAAGATTTGAT 684956 | |||||| || ||||| | ||||| || ||| Sbjct 1587 GTGTATTCGACTATTTCACAGCAAAGGTTGGAT 1555 >seq3088 Length=519 Score = 105 bits (116), Expect = 5e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| || || |||| || ||||||| ||||||||| | |||||| ||||| || | ||| Sbjct 338 AATGTTATAGTCAGATAAAGTTCTTCCATCTTCAAGCTATTTTCCTGCAAAGATCAATCT 279 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || ||||| || || || || ||||| || | ||| || ||| || |||||||| Sbjct 278 TTATTGATCGGGTGGGATGCCCTCTTTGTCCTAAATCTTAGCTTTCACGTTTTCAATTGT 219 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 ||| | | | | || | || | |||||| ||||| || |||||||||||||||| Sbjct 218 ATCTGAGGGCTCAACATCTAAGGTGATAGTTTTGCCAGTGAGTGTTTTAACGAAAATTTA 159 Query 563472 CAT 563474 ||| Sbjct 158 CAT 156 >seq5058 Length=2201 Score = 104 bits (114), Expect = 2e-16 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 550319 TCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC-AGTGCTTT 550377 |||||||| || | ||| ||||| || || | || ||||| | | || || || | Sbjct 551 TCACCAGAGGAAGTGTCAGCTATGATTCTAGTCAAGATGAAGGAGATCGCTGAGAACTAT 610 Query 550378 TGTTGGTCAAGAA--GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCA 550435 | ||| |||| |||| | ||||||| || || || ||||| ||||| ||||| ||| Sbjct 611 C-TAGGT--AGAACTGTTAAGCATGCAGTCATTACCGTCCCAGCTTATTTCAATGATTCA 667 Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495 || | | || ||||| |||||||| | |||||||| || | ||| | ||||||||| Sbjct 668 TAAAGGTAGGCCACTAAGGATGCTGGCCTCATTGCTGGTCTCGACGTTTTACGTATTATC 727 Query 550496 AATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| || || |||||||| |||| || || Sbjct 728 AATGAGCCCACCGCTGCTGCTATTGCCTACGG 759 >seq6871 Length=5731 Score = 86.0 bits (94), Expect = 5e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 |||||||| || ||| |||| |||| | |||||| | ||||| || ||| Sbjct 3476 AAAATGAAGACAATTGCCGAGGCTTACATTGGCCGTGAAGTTCACCACGCAGTCATCACT 3417 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || ||||| || || ||||| | | | ||||| |||||||||||||| ||| ||| Sbjct 3416 GTGCCAGCCTACTTCAATGATGCCTAGAGACAAGCAACTAAAGATGCTGGCAATATAGCT 3357 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || || | || ||||||||||| || || || ||||| || ||| | || || || | Sbjct 3356 GGCCTAGAAGTCCTTCGTATTATTAACGAGCCAACTGCAGCAGCAATCGCTTACGGCATG 3297 Query 550532 GATAA 550536 ||||| Sbjct 3296 GATAA 3292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028225405979560