Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq12968 266 4e-66 >seq12968 Length=2778 Score = 266 bits (294), Expect = 4e-66 Identities = 604/888 (68%), Gaps = 29/888 (3%) Strand=Plus/Plus Query 36885 TTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 |||| |||||| || |||| |||| || || || |||||||| ||| |||||| || | Sbjct 157 TTTTAATATTCCCCGACTC-TCTTCTCAAAGAAGTTTGTCTTGCCTGGTAGTGAAATCAT 215 Query 36944 TTCCATAAAATCAAATGGATTAGATGTATTATA-TA--TAG-TACTACATGATAATTCCT 36999 |||||| | ||||||||||| | ||| || || ||| |||| | ||| | Sbjct 216 TTCCATCCACTCAAATGGATTTAACACATTGTAGTACTTAGGTACTCC----TAAAGCAA 271 Query 37000 TCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAA 37059 || || ||||| || ||||||| ||| |||| | ||||| | | | || ||||||| Sbjct 272 AGAGTAGTCTATCAGCCACAAATTATATATATTGAGCCATTAAGTTAGAATTCATACCAA 331 Query 37060 TTAGTTTTACTGGAATTGC--ATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTT 37117 | |||| ||||| | || | | | | ||| | ||| ||| |||||||| | Sbjct 332 TAAGTTCAACTGGGAGAGCTGAGCAT--ACAAACTCTAATTCAATTTATACAGCATTTGA 389 Query 37118 AACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACA 37177 || || | | ||| ||| | || | || ||||| | |||| | | |||||| Sbjct 390 AATAATCTCCAAAATTCTTTCATTAGATATCTTATTATTTAAGTGTTTATAGAGTAAACA 449 Query 37178 TGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCC 37237 |||||||||| || | ||||||||||| ||||| | ||||||| || || | || Sbjct 450 TGCAAAATCAGTGTGCATGCCTTCATCTCTGCTTATGAGTTCATTACTGAATGTCAGACC 509 Query 37238 TGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAAT 37297 |||||||| || | || || ||||| || || || || || || || || || || Sbjct 510 AGGCATTAATCCGCGCTTCTTCATCCAGAAGATAGCACAGAATGAGCCTGAGAAAAAGAT 569 Query 37298 ACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAA-A 37356 |||||||| || || |||||||| | | | | | || ||| ||| | || | Sbjct 570 ACCTTCAATAGCAGCGAATGCTACTAATCTTTCGGC-ATAG--GAATTATC-TGAGCCTA 625 Query 37357 TCCAtttttttGTCCAATCTGCCTTTAATTTAACA-CATTCA-ATTGTTTCA-ATTGCTT 37413 |||||||| | ||| || |||||| ||| || || | | ||||| ||||||| Sbjct 626 TCCATTTTAAGGCCCATTCGGCCTTT---TTAGCAACAACCGGAATGTTTGTGATTGCTT 682 Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 | || || |||| ||| |||| ||| || || || |||||||| || | | || Sbjct 683 TAAAAAGGAAGTCTTTATCTTATGGATCAGTGATGTAGGTATCAATGAGAAGAGAGTAGG 742 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 | || |||||||| || || || || | ||| || ||||| || ||||| |||| | Sbjct 743 TCTCTGAGTGAATGTTCTCCATCATCATTTAAAATCCGTAAAAGCATCTAGCCTCAGGAA 802 Query 37534 ATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTG 37593 || | || | | ||||| | ||| || || ||| |||||| ||||||||||| | Sbjct 803 TTTAGATTTCAGTGCAGAACCTTTAAGCCAAATTCTCAAGAACTATTCCATCACTAGCAG 862 Query 37594 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAATTTTTTCCA 37651 | || || |||||||||| || ||||| ||| ||||| ||| ||| | ||||| ||| Sbjct 863 CGAAAAAGGCAAGAACATGCTTAATAAAGTGTTTTTCACCATCGTTG--AGTTTTTCCCA 920 Query 37652 ATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACG 37711 || |||| ||| | | ||| || | ||| ||| | ||||| || | |||| | | Sbjct 921 GTCTTTAACATCAGTAGCTAAGTCTATTTCCTCAGCAGTCCAGAAGCAAGCCATTTAATC 980 Query 37712 TTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 ||| |||||| |||| |||||||| | | || || ||||||||||| Sbjct 981 TTTGTACATCTTCCATATATCATTGTATCTGATGGGTAATATTACAAA 1028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592166914233760