Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq16625 95.1 9e-15 >seq16625 Length=1685 Score = 95.1 bits (104), Expect = 9e-15 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATC-- 48595 |||| || ||||||| || |||||||| || ||||| |||||||||||||| ||||| Sbjct 808 CGCCCCCTCTTAGCCTTAAAACCAAATGAAGAGTGCTTTCTTTTTGAATATTATAATCTG 867 Query 48596 AGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGT 48655 ||| || || || || | || | || || |||||||||| ||||| || ||| | Sbjct 868 AGAGTGAATTTAATAATCTT--AATTATTTCCCAGCAAATATCATTCGCTATTAATCTGG 925 Query 48656 GGGAACGCCCTCCTTGTCGCTAATCTT-TTGTTTTACAGAACCCACAGACTCTGACGCCT 48714 || | ||| || || || ||| ||| | |||||| || | | | | ||| | | Sbjct 926 TGGTATGCCTTCTTTATC-CTAGACTTAATATTTTACTTCTCCAATATAATTTGAAGGTT 984 Query 48715 CCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || || | || | ||||| || || | ||| |||| |||||||||||| Sbjct 985 CTACGTCTAAAGTTACTGTTTTACCAGTGAGAGTCTTTAAAAAAATCTGCAT 1036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380843613646812