Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3091 89.7 4e-13 seq14708 82.4 6e-11 >seq3091 Length=1223 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 ||| ||| | || || || || || ||||| ||||| |||||||| || || || Sbjct 150 AAACATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGAGCC 209 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 ||||| || | | | ||||| || ||| ||||| || || | || || Sbjct 210 ATCAGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGA 269 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 |||||| ||||| ||||| || ||||| |||||||||||| | ||| | ||||||| Sbjct 270 TCAACAAAGACTCATCTTCGCTGGCAAGCAATTGGAAGATGGCAGAACCCTCTCCGATTA 329 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| | || || |||||||| || | || || ||| | ||||||| || Sbjct 330 CAACATCTAGAAGGAGTCTACTCTCCATCTAGTTTTGAGACTTAGAGGAGGTAT 383 >seq14708 Length=579 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||| | || || || ||||| | || || || ||||||||| || || || ||| Sbjct 5 ATGTAGATCTTCGTTAAAACTCTTACTGGAAAGACCATTACCTTGGACGTAGAGCCATCA 64 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || ||| ||| |||||||| || | || |||||| Sbjct 65 GATACCATTGAGAATGTGAAAGCAAAGATCTAGGACAAAGAAGGTATTCCACCTGATCAA 124 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||||| || || || || ||||| || |||||| | ||| | | || || ||| Sbjct 125 TAGAGACTCATATTCGCTGGTAAACAGTTAGAAGATGGAAGAACATTATCAGACTACAAC 184 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||||||||||| | ||| | || || |||||| ||||||| || Sbjct 185 ATCTAAAAAGAATCTACATTACACTTAGTCTTGAGATTAAGAGGAGGTAT 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425299842532476