Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq13015 226 1e-54 >seq13015 Length=2880 Score = 226 bits (250), Expect = 1e-54 Identities = 453/660 (69%), Gaps = 15/660 (2%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATG-CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946 ||| |||||||| || || |||||| |||| || ||| | | |||||||| ||||| Sbjct 1342 ATTAGGACAGAA-AAGTGTCCAATCTCCATTAGACTTCACTCTATTCATAAATAGATCTG 1284 Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTT 26006 | | ||| | |||||||| | |||||| ||||| ||| ||||| ||||| ||||| | Sbjct 1283 GCACCCATAAAGCATAAAAGAGATCTCTAGCTCTTTATTCCTCTTTACCGTGGTTCTTCT 1224 Query 26007 TTAGATC-TAAGAAA-TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACT 26064 | | || ||||||| || |||| ||| | ||||| ||||||| ||| || ||||| Sbjct 1223 TCA--TCATAAGAAAATCGAAAACATCAGCATGCCAAGGTTCTAGATAAATGGCAAAGGA 1166 Query 26065 ACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAA 26124 |||||| ||||| || |||||||| || || ||||| ||||||||||||||||| || || Sbjct 1165 ACCTTTCCTTTTACCACCACCTTGGTCAACATATCTAGCAGTTTCATTGAAAACCTTTAA 1106 Query 26125 CATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCT 26184 |||||||| ||| ||| | || | || || |||| | ||| | || |||| | ||| Sbjct 1105 CATTGGAATTAAGCCATTAGAGTAGCCATTAGTGCCTTTAATATAAGAGCCTGAAGCTCT 1046 Query 26185 AATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGA 26244 ||| ||| || || ||||||||||| | || || || ||| | | Sbjct 1045 TATACAATGAATTGAAAGTCCAATTCCACCAGCTGACTTAGATATTAAAGCAGTTTGTCT 986 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 || |||||| | || |||| ||| ||| ||||||| || | ||||| ||||| Sbjct 985 AAGAGTATCGTAGATACCTTGTATTGAATCGTCTTTCATAGTCAAAAGGAAACATGAAGA 926 Query 26305 TAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATA--ATAT 26362 | || | | | ||| || || || ||||| || || || ||||||||| | || | Sbjct 925 CATTTATGGCTTGGGTGTACCAGAGTTGAATAAAGTAGGAGTGGCATGAGTAAACCATTT 866 Query 26363 CCTTCAC-TCAAAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTC 26421 | || | ||| || ||||||||||| | || | | || | || | | | Sbjct 865 ATCTGACATTAAA--TG-ATAAGTTTCAATAGCTCTCTTTACATCATTTTTGTGGATTCC 809 Query 26422 AATAGCTGTTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCT 26481 || | | ||| | | |||| ||||||||||||||| || | ||| | | || | Sbjct 808 TATGGATACTCTCATCAACATTTATTGAGGTCGTTCA---ACGATTTTTCCATGAACTTT 752 Query 26482 AATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCTTTT 26541 | ||||| || || ||||| ||||| || ||||| |||| | || ||||||| || Sbjct 751 GAGTAAATAGGACTTCTCTAAGGTTTTAAAGCCAAAGAAATCGTAATCCCAATCTCTCTT 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252977569022300