Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq6046 143 3e-29 >seq6046 Length=3440 Score = 143 bits (158), Expect = 3e-29 Identities = 276/399 (69%), Gaps = 10/399 (3%) Strand=Plus/Minus Query 138184 CACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTA 138243 ||||||| | || || ||||| || ||||||||||| || ||| | ||||||||||||| Sbjct 2644 CACCAATGGCTCCAACTCCAGGTCCACCACCTCCATGAGGTATAGAAAATGTCTTATGTA 2585 Query 138244 AATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || | |||| ||||| || || ||| | | |||| | || || | |||||| Sbjct 2584 GGTTAAAGTGACCAACATCAGCGCCGATAAT-TCCTGGTGAAGTAAGTCCCATTTGTGCA 2526 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || |||||||| | ||| | || ||||||| | ||| || | | ||| ||| Sbjct 2525 TTAAAGTTGGCACCATCTAAATAGATCTATCCACCATATTTATGTACAACTTCACAAATC 2466 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | | | | |||||||||||||||||| ||| || ||||||||| ||||| Sbjct 2465 TCCTTAACTCCTCCTTCAAATACACCATGAGTACTTGGGTAAGTAATCATAGCGCATGAA 2406 Query 138423 AGTTCA--AATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCAT 138480 |||| | | |||||||| ||| ||| || || ||| | | || || | || | Sbjct 2405 AGTTTATCTTTATATTCATG--TGCCTTCGCCTTTAAATCCTCCACATCGATATCACCGT 2348 Query 138481 CATCA-TC-ACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATT 138538 ||| || || || ||| | |||||||||||||| |||| ||| | || || || Sbjct 2347 --TCACTCTGCAGTTAACAGCCACAACTTTCATTCCAACCATTGAAGCAGTGGCTGGGTT 2290 Query 138539 AGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCT 138577 ||| ||||| ||||| |||| || ||||| | || ||| Sbjct 2289 AGTGCCATGAGCTGAAACTGGAATAAGACAGATATCTCT 2251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578851884454880