Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13015 154 2e-32 >seq13015 Length=2880 Score = 154 bits (170), Expect = 2e-32 Identities = 845/1330 (64%), Gaps = 26/1330 (2%) Strand=Plus/Plus Query 75304 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAG 75363 ||| | ||| || || || || | ||||| |||||||||| | || | ||||| Sbjct 871 GTTTACTCATGCCACTCCTACTTTATTCAACTCTGGTACACCCAAGCCATAAATGTCTTC 930 Query 75364 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 75423 || |||||| | | | || || || ||||| | |||||||| | ||||||| | Sbjct 931 ATGTTTCCTTTTGACTATGAAAGACGATTCAATACAAGGTATCTACGATACTCTTAGACA 990 Query 75424 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGC 75483 ||| ||| || |||| ||||| || ||||| | || ||| | | ||||| Sbjct 991 AACTGCTTTAATATCTAAGTCAGCTGGTGGAATTGGACTTTCAATTCATTGTATAAGAGC 1050 Query 75484 CAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 75543 ||| |||| || || ||||| | || |||| | ||||||||| | Sbjct 1051 TTCAGGCTCTTATATTAAAGGCACTAATGGCTACTCTAATGGCTTAATTCCAATGTTAAA 1110 Query 75544 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCAT 75600 || || || | || || | ||||| | |||| || || | || || ||| | Sbjct 1111 GGTTTTCAATGAAACTGCTAGATATGTTGACCAAGGTGGTGGTAAAAGGAAAGGTTCCTT 1170 Query 75601 CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCA 75659 || | || | ||||| |||||||| ||| | | || || ||| | | | || | Sbjct 1171 TGCCATTTATCTAGAACCTTGGCATGCTGATGTTTTCGATTTTCTTATGATGAAGAAG-A 1229 Query 75660 ACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719 |||| ||| | || || | |||||||||||||| | | ||| | ||||| | Sbjct 1230 ACCACGGTAAAGAGGAATAAAGAGCTAGAGATCTCTTTTATGCTTTATGGGTGCCAGATC 1289 Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779 | || ||||| | || || ||| | ||| | ||||||||||| | |||||| Sbjct 1290 TATTTATGAATAGAGTGAAGTCTAATGGAGATTGGACACTTTTCTGTCCTAATGAGGCAC 1349 Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAG 75838 | || | || | | || ||||| |||||| || || ||||||||| | || Sbjct 1350 CCGGCTTACAAGATGTTTTTGGAGAGGAATTTGAAAAGCTTTATGAAAAGTATGAGAAAG 1409 Query 75839 GAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCA 75898 ||| || || || | | | |||| | ||||| | |||||| | |||| Sbjct 1410 AAGGCAAGGGCAAAAAAGT-TATCAAAGCCTAAAAACTTTGGGAAGCTATTATTGAATCT 1468 Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 || || ||||| || ||||| ||||| || || ||||| || || || || ||| Sbjct 1469 CAACAAGAAACTGGCACTCCATACATGCTCTATAAAGATGCGTGCAATAAAAAATCAAAC 1528 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018 || || |||| || ||||| || || || |||||| ||||| | || |||||| Sbjct 1529 TAATAGCATTTAGGTACAATAAAATCATCCAACCTTTGCTGTGAAATAGTCGAATACACA 1588 Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAAT 76078 ||||| | |||||||| ||| | || ||||| | ||||| | ||||| || Sbjct 1589 TCCCCAGATGAAATTGCTGTTTGTAATCTCGCCTCAATATCTCTTCCTAGATATGTGAAC 1648 Query 76079 GAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAA 76138 |||| | || ||||||||||||| ||| |||||| | || | | || Sbjct 1649 AAAGAATCGTAGACCTTTGATTATGAAAGACTCCATGAAGTGACTCGTGTAATAACTCGC 1708 Query 76139 AATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAAT 76198 ||| ||||| ||||||| || || || || || || || ||| |||||| Sbjct 1709 AATTTAAACAAGATCATTGATGTCAACTTCTACCCAGTAGAAGAAGCCGAAAAATCTAAT 1768 Query 76199 ATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGAT-GTATTTATTTTGTG 76257 | || ||||||||||||||| | |||||| | || || || ||| | | || || || Sbjct 1769 CTCCGTCACAGACCTATTGGTATAGGTGTTTAGGGACTAGCTGATACTTTCTAATTACTG 1828 Query 76258 CCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT 76317 | |||||||| ||||||||||| || |||| || ||||| ||||| Sbjct 1829 -AAATTTGCATTTGAATCAGATGAAGCTGCTGATTTGAACAAGAAGATATTTGAGACCAT 1887 Query 76318 GTATCACGCATC---CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGA 76374 ||||| || || || || | | | || | ||| ||| | || | ||||| Sbjct 1888 TTATCATGCTTCGATGCTTGAATCAA---TTCAACTAGCTAAAGAAGAGGGCCCTTATGA 1944 Query 76375 GACATTTGAGGGTTCTCC-CGC-GTCCCAAGGGGTGCTTC-AGTTTGATATGTGGGAAGG 76431 ||||| | |||||||| | | || || || ||| | |||||| | ||| | | Sbjct 1945 AACATTCTAAGGTTCTCCACTCAGT---AAAGGAAAATTCTAATTTGATCTATGGAATGA 2001 Query 76432 TGAAAC-CAAGCT-CAA-CTACGACTGGGATGTTCTCAAGGAACGCA-TCAAGGAGAAGG 76487 ||| | | || ||| || || ||| | || ||| | | | | | | | | | Sbjct 2002 AGAACCTTATACTACAAGGTATGATTGGTAAACACT-AAGATAGGAAGTTATGTAACACG 2060 Query 76488 GTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 76547 || |||||| ||| | | || || |||||||| || || || ||||||| || | Sbjct 2061 GTGCCCGTAACTCTCTCCTAGTTGCTCCTATGCCAACTGCATCAACTTCACAAATATTAG 2120 Query 76548 GTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAG 76607 | || ||||||| ||||||||| ||||| || || ||||| ||||| | || | Sbjct 2121 GGAACAATGAATCCTTTGAACCCTACACCACCAATGTCTACACAAGAAGGGTATTGGCTG 2180 Query 76608 GTGAGTTTGT 76617 |||||||||| Sbjct 2181 GTGAGTTTGT 2190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596418638062720