Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq14708 134 1e-26 seq11541 134 1e-26 seq3090 123 2e-23 seq3089 123 2e-23 seq3088 122 8e-23 seq3091 111 1e-19 >seq14708 Length=579 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| ||||||| ||||||| |||| || || || ||||| | || || || |||| | Sbjct 233 ATGTAGATCTTCGTTAAAACATTAACTGGAAAGACCATTACTTTAGATGTTGA-GCCATC 291 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || ||| ||| ||| |||| || ||||| || || |||||||| Sbjct 292 TGACACAATTGAAAATGTTAAAGCAAAAATCTAAGATAAGGAAGGTATTCCACCCGATCA 351 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 | || | ||||||||||| || ||| |||| || ||| |||| | || || ||||| Sbjct 352 ATAAAGATTGATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTATAA 411 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| |||||||| || | || || || || ||||| | ||||| Sbjct 412 CATTCAGAAGGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 459 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| ||||||| ||||||| || || || || || ||||| | || ||||| |||| | Sbjct 5 ATGTAGATCTTCGTTAAAACTCTTACTGGAAAGACCATTACCTTGGACGTAGA-GCCATC 63 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || ||| ||||||| | ||||||||||| || || || ||||| Sbjct 64 AGATACCATTGAGAATGTGAAAGCAAAGATCTAGGACAAAGAAGGTATTCCACCTGATCA 123 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 | | | | || || || || |||||| | || ||| |||| | ||||| || || Sbjct 124 ATAGAGACTCATATTCGCTGGTAAACAGTTAGAAGATGGAAGAACATTATCAGACTACAA 183 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||| ||||| ||| ||||||| || ||| |||| | ||||| Sbjct 184 CATCTAAAAAGAATCTACATTACACTTAGTCTTGAGATTAAGAGGAGG 231 >seq11541 Length=746 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| ||||||| ||||||| |||| || || || ||||| | || || || |||| | Sbjct 383 ATGTAGATCTTCGTTAAAACATTAACTGGAAAGACCATTACTTTAGATGTTGA-GCCATC 441 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || ||| ||| ||| |||| || ||||| || || |||||||| Sbjct 442 TGACACAATTGAAAATGTTAAAGCAAAAATCTAAGATAAGGAAGGTATTCCACCCGATCA 501 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 | || | ||||||||||| || ||| |||| || ||| |||| | || || ||||| Sbjct 502 ATAAAGATTGATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTATAA 561 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| |||||||| || | || || || || ||||| | ||||| Sbjct 562 CATTCAGAAGGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 609 >seq3090 Length=995 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| |||| || |||| || |||||||||| || ||||| | || ||||| |||| | Sbjct 154 ATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGA-GCCATC 212 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || || |||||||| Sbjct 213 AGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCACCCGATCA 272 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | | ||||||||||| ||||| || || ||| |||| | || || || || Sbjct 273 ACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTACAA 332 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||| | ||||| || || || ||||| |||||| || Sbjct 333 CATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGA 369 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| | || || || || || || || || || ||| || | Sbjct 382 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 441 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||| | ||||| ||||| || || ||||||||| Sbjct 442 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 501 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || || || || ||||| || || ||| |||| | || || || Sbjct 502 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 561 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || || || ||||| | ||||| | || || Sbjct 562 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGG 608 >seq3089 Length=958 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| |||| || |||| || |||||||||| || ||||| | || ||||| |||| | Sbjct 154 ATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGA-GCCATC 212 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || || |||||||| Sbjct 213 AGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCACCCGATCA 272 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | | ||||||||||| ||||| || || ||| |||| | || || || || Sbjct 273 ACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTACAA 332 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||| | ||||| || || || ||||| |||||| || Sbjct 333 CATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGA 369 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| | ||||| | || || | || || || || || || || || || || |||| | Sbjct 610 ATGTAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGATGTTGA-GCCATC 668 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| ||||| || || || || || |||||||| Sbjct 669 TGACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCA 728 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 | || | |||||||| || || ||||| || || ||| |||| | || || ||||| Sbjct 729 ATAAAGATTGATCTTCGCTGGTAAACAACTTGAAGATGGAAGAACATTATCTGACTATAA 788 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||||| || | || || || || ||||| | ||||| Sbjct 789 CATTCAAAAGGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 836 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| | || || || || || || || || || ||| || | Sbjct 382 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 441 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||| | ||||| ||||| || || ||||||||| Sbjct 442 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 501 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || || || || ||||| || || ||| |||| | || || || Sbjct 502 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 561 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || || || ||||| | ||||| | || || Sbjct 562 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGG 608 >seq3088 Length=519 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| | || || ||||||| || || || |||||||| || | || || || || | Sbjct 156 ATGTAAATTTTCGTTAAAACACTCACTGGCAAAACTATCACCTTAGATGTTGAGCCCTCA 215 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| ||||| | |||||||| || || || ||||||||| Sbjct 216 GATACAATTGAAAACGTGAAAGCTAAGATTTAGGACAAAGAGGGCATCCCACCCGATCAA 275 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || ||| |||| || ||| |||| | || || |||||| Sbjct 276 TAAAGATTGATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTATAAC 335 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || | || || || || ||||| | ||||| Sbjct 336 ATTCAGAAGGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 382 >seq3091 Length=1223 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| |||| || |||| || |||||||||| || ||||| | || ||||| |||| | Sbjct 154 ATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGA-GCCATC 212 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || ||||||||||| Sbjct 213 AGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGATCA 272 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | | ||||| || || || || |||| ||| |||| | | || ||||| || Sbjct 273 ACAAAGACTCATCTTCGCTGGCAAGCAATTGGAAGATGGCAGAACCCTCTCCGATTACAA 332 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| | ||||| || || || || | || ||| || | | ||||| Sbjct 333 CATCTAGAAGGAGTCTACTCTCCATCTAGTTTTGAGACTTAGAGGAGG 380 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| | ||||| |||| || || || || || || || || ||||| || ||| | | Sbjct 382 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGACGTTGAACCATCA 441 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || ||||| || || ||||||||| Sbjct 442 GACACTATTGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGCATCCCACCCGATCAA 501 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | ||||||||||| ||||| || || ||| |||| | || || || ||| Sbjct 502 CAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTACAAC 561 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 || | ||||| || || || ||||| |||||| || Sbjct 562 ATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGA 597 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| | || || || || || || || || || ||| || | Sbjct 610 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 669 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||| | ||||| ||||| || || ||||||||| Sbjct 670 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 729 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || || || || ||||| || || ||| |||| | || || || Sbjct 730 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 789 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || || || ||||| | ||||| | || || Sbjct 790 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGG 836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449783753412320