Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3091 95.1 8e-15 seq3090 95.1 8e-15 seq3089 84.2 1e-11 >seq3091 Length=1223 Score = 95.1 bits (104), Expect = 8e-15 Identities = 165/237 (70%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 34744 ATCATT-TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||||| ||| || || | || || |||| || | || |||||| || ||||||| Sbjct 1072 ATCATTGTCCACCTCTTAGTCTGAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTAT 1013 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 |||| ||||| | | |||| |||| ||||||||| |||||||||| || || || | Sbjct 1012 AGTCGGATAGAGTTCTTCCATCTTCCAATTGCTTTCCTGCGAAGATCAATCTTTATTGAT 953 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATT 34920 | | || | |||||||| || | || || ||||| || || || | ||| Sbjct 952 CGGGTGGGATACCCTCCTTATCTTGAATCTTGGCCTTGAC--ATTCTCAATGGTGTCAGA 895 Query 34921 GGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||| ||||||| ||| |||||||| || || | ||||| || ||||| | ||| Sbjct 894 TGGCTCAACATCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACAT 838 >seq3090 Length=995 Score = 95.1 bits (104), Expect = 8e-15 Identities = 165/237 (70%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 34744 ATCATT-TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||||| ||| || || | || || |||| || | || |||||| || ||||||| Sbjct 844 ATCATTGTCCACCTCTTAGTCTGAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTAT 785 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 |||| ||||| | | |||| |||| ||||||||| |||||||||| || || || | Sbjct 784 AGTCGGATAGAGTTCTTCCATCTTCCAATTGCTTTCCTGCGAAGATCAATCTTTATTGAT 725 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATT 34920 | | || | |||||||| || | || || ||||| || || || | ||| Sbjct 724 CGGGTGGGATACCCTCCTTATCTTGAATCTTGGCCTTGAC--ATTCTCAATGGTGTCAGA 667 Query 34921 GGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||| ||||||| ||| |||||||| || || | ||||| || ||||| | ||| Sbjct 666 TGGCTCAACATCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACAT 610 >seq3089 Length=958 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| || | || | || | ||| ||||| |||||||||||||| ||| Sbjct 836 CCTCCTCTCAATCTTAATACTAAATGCAAGGTTGATTCCTTTTGAATGTTATAGTCAGAT 777 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | |||| || ||||| || || |||||||||| || || || || | || Sbjct 776 AATGTTCTTCCATCTTCAAGTTGTTTACCAGCGAAGATCAATCTTTATTGATCGGGTGGG 717 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | |||||||| || | || || ||||| || || || | ||| | ||| | Sbjct 716 ATACCCTCCTTATCTTGAATCTTGGCCTTGAC--ATTCTCAATGGTGTCAGATGGCTCAA 659 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||| |||||||| || || | ||||| || ||||| | ||| Sbjct 658 CATCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACAT 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325612443851036