Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq11541 86.0 5e-12 >seq11541 Length=746 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||| ||||||| || ||||| | || |||||||| || ||| | || ||| | Sbjct 152 AAAATGTAAATTTTCGTTAAAACACTCACTGGCAAAACTATCACCTTAGATGTTGAGCCC 211 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||||| | | | || ||| |||||| || || || ||| | || ||| Sbjct 212 TCAGATACAATTGAAAACGTCAAAGCTAAGATTTAGGACAAGGAGGGCATCCCACCCGAT 271 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || ||||||| || | || || |||||||| || || | | |||| | | |||||| Sbjct 272 CAATAGAGACTCATATTCGCTGGAAAACAGCTAGAAGATGGAAGAACATTATCAGACTAC 331 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||| || ||||| || ||| | || |||||||| |||| || Sbjct 332 AACATCTAAAAAGAATCTACATTACACTTAGTCTTGAGATTAAGAGGAGG 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398778387620116