Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3091 87.8 2e-12 seq3090 82.4 7e-11 seq3089 82.4 7e-11 >seq3091 Length=1223 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || || || | | ||||||| || | |||||||||||||||| ||| | ||| Sbjct 594 CAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTGCCATC 535 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || ||||| |||| | |||| || | |||||||| || || |||||||| ||||| Sbjct 534 TTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTATC 475 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 || || |||| | || | ||| || | || || || |||| || | || Sbjct 474 TTGGATCTTGGCCTTCACGTTCTCAATAGTGTCTGATGGTTCAACGTCGAGAGTGATGGT 415 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||| || || || | ||| || | ||| Sbjct 414 CTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 382 >seq3090 Length=995 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || || || | | ||||||| || | |||||||||||||||| ||| | ||| Sbjct 366 CAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTGCCATC 307 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || ||||| |||| | |||| || | |||||||| || || |||||||| || || Sbjct 306 TTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTGTC 247 >seq3089 Length=958 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| || || || | | ||||||| || | |||||||||||||||| ||| | ||| Sbjct 366 CAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTGCCATC 307 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || ||||| |||| | |||| || | |||||||| || || |||||||| || || Sbjct 306 TTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTGTC 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476490593535840