Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3091 129 5e-25 seq3090 129 5e-25 seq3089 129 5e-25 seq14708 109 5e-19 seq11541 109 5e-19 seq3088 104 2e-17 >seq3091 Length=1223 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| || || ||||| | ||||| | || || ||| || Sbjct 610 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 669 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || || || || || || ||||| || |||||||| Sbjct 670 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 729 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||||||||||| || || |||||||||||||||| |||| | | || || |||||| Sbjct 730 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 789 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||||| || || || | ||||| || | ||||||||||| |||| Sbjct 790 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAA 838 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | || || || || | || || || | ||||| |||| || ||| ||| | Sbjct 382 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGACGTTGAA-CCATC 440 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || ||||| ||| | || || || || ||||| || || || || |||||||| Sbjct 441 AGACACTATTGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGCATCCCACCCGATCA 500 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||||||||||| | | ||| |||||||| ||||||| |||| | ||||| ||||| Sbjct 501 ACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTACAA 560 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || | || || || ||| | || |||||||| ||| | ||||| || Sbjct 561 CATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGACTCAGAGGTGG 608 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 |||||| | | || || || || |||||||| || | || || | || || || ||| Sbjct 151 AACATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGA-GCC 209 Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | | || || || ||| | || || || || || || || ||||| || ||||| Sbjct 210 ATCAGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGA 269 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| ||||||||||| | || ||||| ||| | ||||||| |||| || |||||| Sbjct 270 TCAACAAAGACTCATCTTCGCTGGCAAGCAATTGGAAGATGGCAGAACCCTCTCCGATTA 329 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| || | || || || || | ||| |||| || ||| | |||||||| Sbjct 330 CAACATCTAGAAGGAGTCTACTCTCCATCTAGTTTTGAGACTTAGAGGAGG 380 >seq3090 Length=995 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| || || ||||| | ||||| | || || ||| || Sbjct 382 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 441 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || || || || || || ||||| || |||||||| Sbjct 442 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 501 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||||||||||| || || |||||||||||||||| |||| | | || || |||||| Sbjct 502 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 561 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||||| || || || | ||||| || | ||||||||||| |||| Sbjct 562 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAA 610 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 |||||| | | || || || || |||||||| || | || || | || || || ||| Sbjct 151 AACATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGA-GCC 209 Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | | || || || ||| | || || || || || || || || || || ||||| Sbjct 210 ATCAGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCACCCGA 269 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| ||||||||||| | | ||| |||||||| ||||||| |||| | ||||| || Sbjct 270 TCAACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTA 329 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| || | || || || ||| | || |||||||| ||| | ||||| || Sbjct 330 CAACATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGACTCAGAGGTGG 380 >seq3089 Length=958 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| || || ||||| | ||||| | || || ||| || Sbjct 382 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 441 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || || || || || || ||||| || |||||||| Sbjct 442 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 501 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||||||||||| || || |||||||||||||||| |||| | | || || |||||| Sbjct 502 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 561 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||||| || || || | ||||| || | ||||||||||| |||| Sbjct 562 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAA 610 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||| || | || || || || || || || || | ||||| | || || || |||| | Sbjct 610 ATGTAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGATGTTGA-GCCATC 668 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || ||| | || || || ||| ||||| |||||||| || |||||||| Sbjct 669 TGACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCA 728 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||||| | || | || || |||||||| ||||||| |||| | || || || Sbjct 729 ATAAAGATTGATCTTCGCTGGTAAACAACTTGAAGATGGAAGAACATTATCTGACTATAA 788 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| ||||| ||| | |||||||| ||||||||||||||||| Sbjct 789 CATTCAAAAGGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 |||||| | | || || || || |||||||| || | || || | || || || ||| Sbjct 151 AACATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGA-GCC 209 Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | | || || || ||| | || || || || || || || || || || ||||| Sbjct 210 ATCAGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCACCCGA 269 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| ||||||||||| | | ||| |||||||| ||||||| |||| | ||||| || Sbjct 270 TCAACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTA 329 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| || | || || || ||| | || |||||||| ||| | ||||| || Sbjct 330 CAACATCTAGAAGGAGTCAACCCTCCACTTAGTGTTGAGACTCAGAGGTGG 380 >seq14708 Length=579 Score = 109 bits (120), Expect = 5e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC-GATACTAT 25242 || || ||||||||||| ||||| | || || | || || | ||||| | || || || Sbjct 242 TTCGTTAAAACATTAACTGGAAAGACCATTACTTTAGATGTTG-AGCCATCTGACACAAT 300 Query 25243 CGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACT 25302 || | || ||| |||||| ||||| || ||||| || |||||||| ||||| | Sbjct 301 TGAAAATGTTAAAGCAAAAATCTAAGATAAGGAAGGTATTCCACCCGATCAATAAAGATT 360 Query 25303 CATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAA 25362 || | | || ||| | || ||||||| |||| | | || || || ||||| || Sbjct 361 GATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTATAACATTCAGAA 420 Query 25363 AGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| ||| | |||||||| ||||||||||||||||| Sbjct 421 GGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 459 >seq11541 Length=746 Score = 109 bits (120), Expect = 5e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC-GATACTAT 25242 || || ||||||||||| ||||| | || || | || || | ||||| | || || || Sbjct 392 TTCGTTAAAACATTAACTGGAAAGACCATTACTTTAGATGTTG-AGCCATCTGACACAAT 450 Query 25243 CGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACT 25302 || | || ||| |||||| ||||| || ||||| || |||||||| ||||| | Sbjct 451 TGAAAATGTTAAAGCAAAAATCTAAGATAAGGAAGGTATTCCACCCGATCAATAAAGATT 510 Query 25303 CATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAA 25362 || | | || ||| | || ||||||| |||| | | || || || ||||| || Sbjct 511 GATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTATAACATTCAGAA 570 Query 25363 AGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| ||| | |||||||| ||||||||||||||||| Sbjct 571 GGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 609 >seq3088 Length=519 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||| || | || || |||||| | || || ||| | ||||| | || || || || Sbjct 153 AAAATGTAAATTTTCGTTAAAACACTCACTGGCAAAACTATCACCTTAGATGTTGAGCCC 212 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 ||||| || || | || ||| || ||| || |||||||| || || |||||| Sbjct 213 TCAGATACAATTGAAAACGTGAAAGCTAAGATTTAGGACAAAGAGGGCATCCCACCCGAT 272 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 || ||||| | || | | || ||| | || ||||||| |||| | | || || Sbjct 273 CAATAAAGATTGATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTAT 332 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| || ||||| ||| | |||||||| ||||||||||||||||| Sbjct 333 AACATTCAGAAGGAATCAACCTTGCATTTAGTATTAAGATTGAGAGGAGG 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444981768862080