Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3090 141 9e-29 seq3089 141 9e-29 seq3091 125 7e-24 seq14708 111 2e-19 seq11541 111 2e-19 seq3088 98.7 1e-15 >seq3090 Length=995 Score = 141 bits (156), Expect = 9e-29 Identities = 183/249 (73%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || |||||||||| |||||| | ||| || || || ||||| | ||||||||||||| | Sbjct 380 CCACCTCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTC 321 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || | || || || ||||| || ||||| || | | || |||||||| || Sbjct 320 AAGGTTCTGCCA-TCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGG 262 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || ||||| || || ||||| || | ||||| || | || || Sbjct 261 GATGCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTAC 202 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGTTTTTGT 134724 ||| | |||||||| ||||||||||| || ||||||||||| | ||| ||| |||| | Sbjct 201 GTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCT 142 Query 134725 TCAACGTTT 134733 | || |||| Sbjct 141 TTAAAGTTT 133 >seq3089 Length=958 Score = 141 bits (156), Expect = 9e-29 Identities = 183/249 (73%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || |||||||||| |||||| | ||| || || || ||||| | ||||||||||||| | Sbjct 380 CCACCTCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTC 321 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || | || || || ||||| || ||||| || | | || |||||||| || Sbjct 320 AAGGTTCTGCCA-TCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGG 262 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || ||||| || || ||||| || | ||||| || | || || Sbjct 261 GATGCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTAC 202 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGTTTTTGT 134724 ||| | |||||||| ||||||||||| || ||||||||||| | ||| ||| |||| | Sbjct 201 GTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCT 142 Query 134725 TCAACGTTT 134733 | || |||| Sbjct 141 TTAAAGTTT 133 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | || || || | || | || ||||||||||||||||| ||||| | Sbjct 836 CCTCCTCTCAATCTTAATACTAAATGCAAGGTTGATTCCTTTTGAATGTTATAGTCAGAT 777 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || || ||||| || || || ||||| | | |||||||| || Sbjct 776 AATGTTCTTCCA-TCTTCAAGTTGTTTACCAGCGAAGATCAATCTTTATTGATCGGGTGG 718 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || |||||||| || ||||| || | ||||| || | || || Sbjct 717 GATACCCTCCTTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAAC 658 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || ||||| || || || ||||| || ||||| |||| |||| Sbjct 657 ATCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATTTACATT 609 >seq3091 Length=1223 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || |||||||||| |||||| | ||| || || || ||||| | ||||||||||||| | Sbjct 608 CCACCTCTGAGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTC 549 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || | || || || ||||| || ||||| || | | || |||||||| || Sbjct 548 AAGGTTCTGCCA-TCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGG 490 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || ||||| || || || || || | ||||| || | ||| || Sbjct 489 GATGCCTTCCTTATCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCTGATGGTTCAAC 430 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| ||||| || || || | || |||||||| |||| ||| Sbjct 429 GTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 382 Score = 109 bits (120), Expect = 6e-19 Identities = 176/249 (71%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| |||| ||| || || || || || || ||||| | |||||||| ||| Sbjct 380 CCTCCTCTAAGTCTCAAAACTAGATGGAGAGTAGACTCCTTCTAGATGTTGTAATCGGAG 321 Query 134547 ACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| || | || || | || ||||| || || || | | || |||||||| || Sbjct 320 AGGGTTCTGCCA-TCTTCCAATTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGAGG 262 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| || | ||||| || | || || Sbjct 261 GATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTAC 202 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGTTTTTGT 134724 ||| | |||||||| ||||||||||| || ||||||||||| | ||| ||| |||| | Sbjct 201 GTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCT 142 Query 134725 TCAACGTTT 134733 | || |||| Sbjct 141 TTAAAGTTT 133 >seq14708 Length=579 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | || || || | || | || |||||||| |||||||| ||||| | Sbjct 459 CCTCCTCTCAATCTTAATACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGAT 400 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || |||| ||| |||||||| ||||| | | |||||||| || Sbjct 399 AAAGTTCTTCCA-TCTTCAAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGG 341 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||| |||||| ||| || || | |||||| || | || || Sbjct 340 AATACCTTCCTTATCTTAGATTTTTGCTTTAACATTTTCAATTGTGTCAGATGGCTCAAC 281 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||||||| || || ||||| ||||||||||| || | ||| Sbjct 280 ATCTAAAGTAATGGTCTTTCCAGTTAATGTTTTAACGAAGATCTACAT 233 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | || ||| || | ||||| || ||||| |||| ||||||||||| | Sbjct 231 CCTCCTCTTAATCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGAT 172 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | |||||| || || || || | | || ||||| || || Sbjct 171 AATGTTCTTCCA-TCTTCTAACTGTTTACCAGCGAATATGAGTCTCTATTGATCAGGTGG 113 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| || | || ||| ||| || || | || || || | || || Sbjct 112 AATACCTTCTTTGTCCTAGATCTTTGCTTTCACATTCTCAATGGTATCTGATGGCTCTAC 53 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| | |||||||| || || || | |||||||||||| || | ||| Sbjct 52 GTCCAAGGTAATGGTCTTTCCAGTAAGAGTTTTAACGAAGATCTACAT 5 >seq11541 Length=746 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | || || || | || | || |||||||| |||||||| ||||| | Sbjct 609 CCTCCTCTCAATCTTAATACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGAT 550 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || |||| ||| |||||||| ||||| | | |||||||| || Sbjct 549 AAAGTTCTTCCA-TCTTCAAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGG 491 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||| |||||| ||| || || | |||||| || | || || Sbjct 490 AATACCTTCCTTATCTTAGATTTTTGCTTTAACATTTTCAATTGTGTCAGATGGCTCAAC 431 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||||||| || || ||||| ||||||||||| || | ||| Sbjct 430 ATCTAAAGTAATGGTCTTTCCAGTTAATGTTTTAACGAAGATCTACAT 383 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | || ||| || | ||||| || ||||| |||| ||||||||||| | Sbjct 381 CCTCCTCTTAATCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGAT 322 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || |||||||| || || || || | | || |||||||| || Sbjct 321 AATGTTCTTCCA-TCTTCTAGCTGTTTTCCAGCGAATATGAGTCTCTATTGATCGGGTGG 263 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || | ||| || |||||| || | ||| || || | || || Sbjct 262 GATGCCCTCCTTGTCCTAAATCTTAGCTTTGACGTTTTCAATTGTATCTGAGGGCTCAAC 203 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || | || || ||||| || || | |||||||||||||||| |||||| Sbjct 202 ATCTAAGGTGATAGTTTTGCCAGTGAGTGTTTTAACGAAAATTTACATTTT 152 >seq3088 Length=519 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | || || || | || | || |||||||| |||||||| ||||| | Sbjct 382 CCTCCTCTCAATCTTAATACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGAT 323 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || |||| ||| |||||||| ||||| | | |||||||| || Sbjct 322 AAAGTTCTTCCA-TCTTCAAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGG 264 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| ||||| || | ||| || ||| || || | ||| || || | || || Sbjct 263 GATGCCCTCTTTGTCCTAAATCTTAGCTTTCACGTTTTCAATTGTATCTGAGGGCTCAAC 204 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || | || || ||||| || || | |||||||||||||||| |||||| Sbjct 203 ATCTAAGGTGATAGTTTTGCCAGTGAGTGTTTTAACGAAAATTTACATTTT 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505270508934880