Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq13015 199 5e-46 >seq13015 Length=2880 Score = 199 bits (220), Expect = 5e-46 Identities = 876/1367 (64%), Gaps = 36/1367 (3%) Strand=Plus/Plus Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373 ||| | ||| || || || || | ||||| |||||||||| | || ||||||| Sbjct 871 GTTTACTCATGCCACTCCTACTTTATTCAACTCTGGTACACCCAAGCCATAAATGTCTTC 930 Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433 || |||||| | | | || || || ||||| | |||||||| | ||||||| | Sbjct 931 ATGTTTCCTTTTGACTATGAAAGACGATTCAATACAAGGTATCTACGATACTCTTAGACA 990 Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGC 104493 ||| ||| || |||| ||||| || ||||| | || ||| | | ||||| Sbjct 991 AACTGCTTTAATATCTAAGTCAGCTGGTGGAATTGGACTTTCAATTCATTGTATAAGAGC 1050 Query 104494 CAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 104553 ||| |||| || || ||||| | || |||| | ||||||||| | Sbjct 1051 TTCAGGCTCTTATATTAAAGGCACTAATGGCTACTCTAATGGCTTAATTCCAATGTTAAA 1110 Query 104554 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG---GGATCTAT 104610 || || || | || || | ||||| | |||| ||| || || | || || | Sbjct 1111 GGTTTTCAATGAAACTGCTAGATATGTTGACCAAGGTGGTGGTAAAAGGAAAGGTTCCTT 1170 Query 104611 CGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAA 104670 || | ||||| || || ||||| || ||| | | || || ||| | || || Sbjct 1171 TGCCATTTATCTAGAACCTTGGCATGCTGATGTTTTCGATTTTCTTATGATGAAGAAGAA 1230 Query 104671 CCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCT 104730 ||| ||| | ||||| | | |||||||| | ||| | ||| | |||||||| Sbjct 1231 CCACGGTAAAGAGGAATAAAGAGCTAGAGATCTCTTTTATGCTTTATGGGTGCCAGATCT 1290 Query 104731 CTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACC 104790 || ||||| ||||| || | ||| ||||| | || || ||||| | ||||||| Sbjct 1291 ATTTATGAATAGAGTGAAGTCTAATGGAGATTGGACACTTTTCTGTCCTAATGAGGCACC 1350 Query 104791 TGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGA 104850 || | |||| | || ||||| |||||| ||||| |||||| ||| |||| Sbjct 1351 CGGCTTACAAGATGTTTTTGGAGAGGAATTTGAAAAGCTTTATGAAAAGTATGAGAAAGA 1410 Query 104851 AGGTC-GGGCGACTGCGACGGTGCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTC 104907 ||| |||| | | | | || || | | ||| |||||||| | | || Sbjct 1411 AGGCAAGGGCAAAA---AAGTTATCAAAGCCTAAAAACTTTGGGAAGCTATTATTGAATC 1467 Query 104908 TCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAA 104967 |||| || ||||| || ||||||||||| || ||||| || || || |||| || Sbjct 1468 TCAACAAGAAACTGGCACTCCATACATGCTCTATAAAGATGCGTGCAATAAAAAATCAAA 1527 Query 104968 TCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTAC 105027 || || |||| ||| || || ||||| || || ||||| | |||| || Sbjct 1528 CTAATAGCATTTAGGTACAATAAAATCATCCAACCTTTGCTGTGAAATAGTCGAATACAC 1587 Query 105028 AGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA 105087 | | |||||| | ||||| ||||| ||||| ||||| |||| || | |||||| | Sbjct 1588 ATCCCCAGATGAAATTGCTGTTTGTAATCTCGCCTCAATATCTCTTCCTAGATATGTGAA 1647 Query 105088 TCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC----GAAAACTGTCA 105143 ||| | |||| ||||||||||||| |||||| ||||| || | || | | Sbjct 1648 CAAAGAATCGTAGACCTTTGATTATGAAAGACTCCATGAAGTGACTCGTGTAA----TAA 1703 Query 105144 CCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 105203 | || |||||| | |||||| || || ||||| || || || |||| Sbjct 1704 CTCGCAATTTAAACAAGATCATTGATGTCAACTTCTACCCAGTAGAAGAAGCCGAAAAAT 1763 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTC 105263 ||||| | | ||| | || |||||| | |||||| |||| || || ||| ||| | Sbjct 1764 CTAATCTCCGTCACAGACCTATTGGTATAGGTGTTTAGGGACTAGCTGATACTTTC--TA 1821 Query 105264 TTTGTCGCCA--CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGA 105321 || | | |||||||| || || ||||| || | || | |||||||| Sbjct 1822 ATTACTGAAATTTGCATTTGAATCAGATGAAGCTGCTGATTTGAACAAGAAGATATTTGA 1881 Query 105322 GACCATGTATCACGC--CGCT-CTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCC 105378 |||||| ||||| || || | ||||| | | ||| | | || | | || || || Sbjct 1882 GACCATTTATCATGCTTCGATGCTTGAATC-AATTC--AACTAGCTAAAGAAGAGGGCCC 1938 Query 105379 ATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTC-AATTTGATATGTGGG 105437 |||||||| || | ||||||||| || || || ||| |||||||| | ||| Sbjct 1939 TTATGAAACATTCTAAGGTTCTCCA-CTCAGTAAAGGAAAATTCTAATTTGATCTATGGA 1997 Query 105438 AAGGTGAGACC--AAGCTTCA--CTACGACTGGGAAGCTCTCAAGGAACGCA-TCAAGGA 105492 | | || ||| | || || || || ||| || | || ||| | | | | | | | Sbjct 1998 ATGAAGA-ACCTTATACTACAAGGTATGATTGGTAAACACT-AAGATAGGAAGTTATGTA 2055 Query 105493 GAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAAT 105552 | ||| |||||| |||||| | ||||| |||||||| || || || ||||||| Sbjct 2056 ACACGGTGCCCGTAACTCTCTCCTAGTTGCTCCTATGCCAACTGCATCAACTTCACAAAT 2115 Query 105553 CTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCT 105612 || || || ||||||| ||||||||||||||| || || |||| ||||| | Sbjct 2116 ATTAGGGAACAATGAATCCTTTGAACCCTACACCACCAATGTCTACACAAGAAGGGTATT 2175 Query 105613 CGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCA 105659 || || |||||||| || ||| ||||| ||| ||||||| Sbjct 2176 GGCTGGTGAGTTTGTATGCGTTAACCCACATCTAGTGAGAGACCTCA 2222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583113205854560