Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq3539 84.2 2e-11 >seq3539 Length=1811 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/120 (76%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 111819 AGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGA 111878 ||| || || |||||||| || || |||||||| | || |||||||| | |||||||| Sbjct 1444 AGCTATATTGAATGGCACTCCAAGACCCATATCACAAGACCTTTGATACATTTGACATGA 1385 Query 111879 TAGTTTATT---TTGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 ||| ||||| | ||||||||| ||||| ||||||||| || || || | ||||| Sbjct 1384 TAGCTTATTGTCTGCTGACACATAGAATTGTGCAAGTACATGGCAGGGTGGAAGAGCCAT 1325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391848897711772