Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3091 120 3e-22 seq3090 120 3e-22 seq3089 116 3e-21 seq14708 107 2e-18 seq11541 95.1 1e-14 seq3088 86.0 5e-12 >seq3091 Length=1223 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||| |||| || || || || | ||||| ||| | ||||| | || || || || || Sbjct 153 CATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGAGCCATC 212 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| ||||| || || |||||||| ||||| || || |||||||| Sbjct 213 AGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGATCA 272 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| ||||| ||||||||||| | ||| | ||||||||||| Sbjct 273 ACAAAGACTCATCTTCGCTGGCAAGCAATTGGAAGATGGCAGAACCCTCTCCGATTACAA 332 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 ||| | |||||||| || | ||| | |||||| Sbjct 333 CATCTAGAAGGAGTCTACTCTCCATCTAGTTTTG 366 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| | || || || || ||| |||| |||||| | || || ||||| || || || || Sbjct 838 ATGTAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGATGTTGAGCCATCT 897 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || |||||||| || || || || |||||||||||| Sbjct 898 GACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCAA 957 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 | | || || | ||| || || ||||||||||| | || | ||||| || ||| Sbjct 958 TAAAGATTGATCTTCGCAGGAAAGCAATTGGAAGATGGAAGAACTCTATCCGACTATAAC 1017 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || ||||||||||| || | |||||||| Sbjct 1018 ATCCAAAAGGAGTCAACTCTCCATTTGGT 1046 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| | || || || || || || || |||||| | || ||||| || || ||||| || Sbjct 382 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGACGTTGAACCATCA 441 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || ||||| || |||||||| |||||||||||| Sbjct 442 GACACTATTGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGCATCCCACCCGATCAA 501 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||||| |||||| | ||||| | ||| | ||| |||||| Sbjct 502 CAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTACAAC 561 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || | |||||||| ||| | || || || ||| Sbjct 562 ATCTAGAAGGAGTCAACCCTCCACTTAGTGTTG 594 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || ||| | || |||||||| || ||||| || Sbjct 610 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 669 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || | ||||| ||||| || || ||||||||| Sbjct 670 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 729 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || |||||| | ||||| | || | || ||||| Sbjct 730 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 789 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | ||||||||| | | ||| | ||||| || Sbjct 790 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAAT 839 >seq3090 Length=995 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| | || || || || ||| |||| |||||| | || || ||||| || || || || Sbjct 610 ATGTAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGATGTTGAGCCATCT 669 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || |||||||| || || || || |||||||||||| Sbjct 670 GACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCAA 729 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 | | || || | ||| || || ||||||||||| | || | ||||| || ||| Sbjct 730 TAAAGATTGATCTTCGCAGGAAAGCAATTGGAAGATGGAAGAACTCTATCCGACTATAAC 789 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || ||||||||||| || | |||||||| Sbjct 790 ATCCAAAAGGAGTCAACTCTCCATTTGGT 818 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||| |||| || || || || | ||||| ||| | ||||| | || || || || || Sbjct 153 CATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGAGCCATC 212 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| ||||| || || |||||||| |||||||| ||||||||||| Sbjct 213 AGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCACCCGATCA 272 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||||| |||||| | ||||| | ||| | ||| ||||| Sbjct 273 ACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTACAA 332 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 ||| | |||||||| ||| | || || || ||| Sbjct 333 CATCTAGAAGGAGTCAACCCTCCACTTAGTGTTG 366 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || ||| | || |||||||| || ||||| || Sbjct 382 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 441 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || | ||||| ||||| || || ||||||||| Sbjct 442 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 501 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || |||||| | ||||| | || | || ||||| Sbjct 502 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 561 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | ||||||||| | | ||| | ||||| || Sbjct 562 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAAT 611 >seq3089 Length=958 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| | || || || || ||| |||| |||||| | || || ||||| || || || || Sbjct 610 ATGTAAATCTTCGTCAAGACTTTGACTGGCAAGACCATCACCCTTGATGTTGAGCCATCT 669 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || |||||||| || || || || |||||||||||| Sbjct 670 GACACCATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAGGGTATCCCACCCGATCAA 729 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 | | || || | ||| || |||||| | ||||| | || | || || || ||| Sbjct 730 TAAAGATTGATCTTCGCTGGTAAACAACTTGAAGATGGAAGAACATTATCTGACTATAAC 789 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||||||||||| || ||||| ||||| || || Sbjct 790 ATTCAAAAGGAATCAACCTTGCATTTAGTATT 821 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||| |||| || || || || | ||||| ||| | ||||| | || || || || || Sbjct 153 CATGTAGATTTTCGTTAAGACCTTAACCGGTAAGACCATTACATTGGACGTAGAGCCATC 212 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| ||||| || || |||||||| |||||||| ||||||||||| Sbjct 213 AGACACCATTGAGAACGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCCACCCGATCA 272 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||||| |||||| | ||||| | ||| | ||| ||||| Sbjct 273 ACAAAGACTCATCTTTGCCGGAAAACAACTTGAAGATGGCAGAACCTTGAGCGACTACAA 332 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 ||| | |||||||| ||| | || || || ||| Sbjct 333 CATCTAGAAGGAGTCAACCCTCCACTTAGTGTTG 366 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || ||| | || |||||||| || ||||| || Sbjct 382 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACCATCACTCTTGATGTTGAACCCTCA 441 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || | ||||| ||||| || || ||||||||| Sbjct 442 GACACCATCGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 501 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || |||||| | ||||| | || | || ||||| Sbjct 502 CAAAGACTCATTTTCGCTGGAAAACAACTCGAAGATGGAAGAACTCTAAGTGACTACAAT 561 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | ||||||||| | | ||| | ||||| || Sbjct 562 ATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCAGATTGAGAGGTGGAAT 611 >seq14708 Length=579 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||| |||| || || |||||||| || || ||| | ||||| | || || || || || Sbjct 4 CATGTAGATCTTCGTTAAAACTCTTACTGGAAAGACCATTACCTTGGACGTAGAGCCATC 63 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||||| || ||| ||| || | ||||||||||| || ||||| ||||| Sbjct 64 AGATACCATTGAGAATGTGAAAGCAAAGATCTAGGACAAAGAAGGTATTCCACCTGATCA 123 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 | || | | |||| ||| || ||||| || ||||| | || | || || ||||| Sbjct 124 ATAGAGACTCATATTCGCTGGTAAACAGTTAGAAGATGGAAGAACATTATCAGACTACAA 183 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 ||| |||| || || || ||||| || || ||| Sbjct 184 CATCTAAAAAGAATCTACATTACACTTAGTCTTG 217 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| |||| || || ||||| | || || ||| | |||||| | || || || || || Sbjct 233 ATGTAGATCTTCGTTAAAACATTAACTGGAAAGACCATTACTTTAGATGTTGAGCCATCT 292 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||| |||| || ||||| || |||||||||||| Sbjct 293 GACACAATTGAAAATGTTAAAGCAAAAATCTAAGATAAGGAAGGTATTCCACCCGATCAA 352 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 | | || || | || || ||| | | ||||| | || | || || || ||| Sbjct 353 TAAAGATTGATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTATAAC 412 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||||| ||||| || ||||| ||||| || || Sbjct 413 ATTCAGAAGGAATCAACCTTGCATTTAGTATT 444 >seq11541 Length=746 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| |||| || || ||||| | || || ||| | |||||| | || || || || || Sbjct 383 ATGTAGATCTTCGTTAAAACATTAACTGGAAAGACCATTACTTTAGATGTTGAGCCATCT 442 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||| |||| || ||||| || |||||||||||| Sbjct 443 GACACAATTGAAAATGTTAAAGCAAAAATCTAAGATAAGGAAGGTATTCCACCCGATCAA 502 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 | | || || | || || ||| | | ||||| | || | || || || ||| Sbjct 503 TAAAGATTGATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTATAAC 562 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||||| ||||| || ||||| ||||| || || Sbjct 563 ATTCAGAAGGAATCAACCTTGCATTTAGTATT 594 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| | || || || ||||| || || ||||| |||| || | || || || || || Sbjct 155 ATGTAAATTTTCGTTAAAACACTCACTGGCAAAACTATCACCTTAGATGTTGAGCCCTCA 214 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || ||| | ||||| || ||||| |||||||||||| Sbjct 215 GATACAATTGAAAACGTCAAAGCTAAGATTTAGGACAAGGAGGGCATCCCACCCGATCAA 274 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | |||| ||| || ||||| | ||||| | || | || || |||||| Sbjct 275 TAGAGACTCATATTCGCTGGAAAACAGCTAGAAGATGGAAGAACATTATCAGACTACAAC 334 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || |||| || || || ||||| || || ||| Sbjct 335 ATCTAAAAAGAATCTACATTACACTTAGTCTTG 367 >seq3088 Length=519 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| | || || || ||||| || || ||||| |||| || | || || || || || Sbjct 156 ATGTAAATTTTCGTTAAAACACTCACTGGCAAAACTATCACCTTAGATGTTGAGCCCTCA 215 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| || ||| | |||||||| ||||| |||||||||||| Sbjct 216 GATACAATTGAAAACGTGAAAGCTAAGATTTAGGACAAAGAGGGCATCCCACCCGATCAA 275 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 | | || || | || || ||| | | ||||| | || | || || || ||| Sbjct 276 TAAAGATTGATCTTTGCAGGAAAATAGCTTGAAGATGGAAGAACTTTATCTGACTATAAC 335 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||||| ||||| || ||||| ||||| || || Sbjct 336 ATTCAGAAGGAATCAACCTTGCATTTAGTATT 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434808343898880