Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3091 156 1e-32 seq3090 156 1e-32 seq3089 156 1e-32 seq14708 114 3e-20 seq11541 107 4e-18 seq3088 100 7e-16 >seq3091 Length=1223 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || ||||| ||||| |||||||| || || || || || ||||| Sbjct 825 TCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCC 766 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| || || || || ||||| || || | |||||| || || |||| |||||||| Sbjct 765 ATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTT 706 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| |||||| || ||||||||||||||||| ||| |||||| || |||||||| Sbjct 705 GTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGAT 646 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| || | ||| || || || | ||||| Sbjct 645 GGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 610 Score = 143 bits (158), Expect = 6e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| | || || || ||||| ||||| || | |||||| ||||| | ||||| || Sbjct 372 AAGTCTCAAAACTAGATGGAGAGTAGACTCCTTCTAGATGTTGTAATCGGAGAGGGTTCT 313 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||||| |||||||| |||||||| || | |||||| || ||||| | ||||| Sbjct 312 GCCATCTTCCAATTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGAGGGATACCTTC 253 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 |||||| |||||||| || ||||| || |||||||| || || || || | || Sbjct 252 CTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGT 193 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTACTT 211127 || ||||| || || | ||||| || || | || ||| || || || ||| Sbjct 192 AATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCTT 141 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | || ||||| ||||| |||||||||||||| || | || || ||| Sbjct 1055 AGTCTGAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTATAGTCGGATAGAGTTCTT 996 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||| ||||| ||||||||||| | | || ||| || || || | || ||| Sbjct 995 CCATCTTCCAATTGCTTTCCTGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCC 936 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || || ||||| || || || || ||||||||||| ||||| || || ||| Sbjct 935 TTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTG 876 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || || | |||||| || || Sbjct 875 ATGGTCTTGCCAGTCAAAGTCTTGACGAA 847 Score = 132 bits (146), Expect = 1e-25 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCT 210955 ||||| | || | ||| || || ||||| || | |||||| || || | ||||| || | Sbjct 599 AGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTC-T 541 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||| || || || || || ||||| || | |||||| || || || | ||||| Sbjct 540 GCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTC 481 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 ||| || |||||||| |||||||| || || ||||| || |||||| |||||||| Sbjct 480 CTTATCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCTGATGGTTCAACGTCGAGAGT 421 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||| ||||| || ||||| ||||| || || Sbjct 420 GATGGTCTTGCCAGTGAGGGTCTTAACGAA 391 >seq3090 Length=995 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || ||||| ||||| |||||||| || || || || || ||||| Sbjct 597 TCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCC 538 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| || || || || ||||| || || | |||||| || || |||| |||||||| Sbjct 537 ATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTT 478 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| |||||| || ||||||||||||||||| ||| |||||| || |||||||| Sbjct 477 GTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGAT 418 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| || | ||| || || || | ||||| Sbjct 417 GGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 382 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | || ||||| ||||| |||||||||||||| || | || || ||| Sbjct 827 AGTCTGAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTATAGTCGGATAGAGTTCTT 768 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||| ||||| ||||||||||| | | || ||| || || || | || ||| Sbjct 767 CCATCTTCCAATTGCTTTCCTGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCC 708 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || || ||||| || || || || ||||||||||| ||||| || || ||| Sbjct 707 TTATCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTG 648 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || || | |||||| || || Sbjct 647 ATGGTCTTGCCAGTCAAAGTCTTGACGAA 619 Score = 109 bits (120), Expect = 1e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCT 210955 ||||| | || | ||| || || ||||| || | |||||| || || | ||||| || | Sbjct 371 AGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTC-T 313 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||| || || || || || ||||| || | |||||| || || || | ||||| Sbjct 312 GCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTC 253 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 |||||| |||||||| || ||||| || |||||||| || || || || | || Sbjct 252 CTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGT 193 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTACTT 211127 || ||||| || || | ||||| || || | || ||| || || || ||| Sbjct 192 AATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCTT 141 >seq3089 Length=958 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || ||||| ||||| |||||||| || || || || || ||||| Sbjct 597 TCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCC 538 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| || || || || ||||| || || | |||||| || || |||| |||||||| Sbjct 537 ATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTT 478 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| |||||| || ||||||||||||||||| ||| |||||| || |||||||| Sbjct 477 GTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGAT 418 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| || | ||| || || || | ||||| Sbjct 417 GGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 382 Score = 109 bits (120), Expect = 1e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCT 210955 ||||| | || | ||| || || ||||| || | |||||| || || | ||||| || | Sbjct 371 AGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTC-T 313 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||| || || || || || ||||| || | |||||| || || || | ||||| Sbjct 312 GCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTC 253 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 |||||| |||||||| || ||||| || |||||||| || || || || | || Sbjct 252 CTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGT 193 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTACTT 211127 || ||||| || || | ||||| || || | || ||| || || || ||| Sbjct 192 AATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCTT 141 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||| |||||||| || | | || ||||||||||| || || || || Sbjct 806 GTTGATTCCTTTTGAATGTTATAGTCAGATAATGTTCTTCCATCTTCAAGTTGTTTACCA 747 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | | || ||| || || || | || ||||| || || ||||| || Sbjct 746 GCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTTGAATCTTGGCCTTG 687 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || || ||||||||||| ||||| || || ||||| ||||| || || | |||| Sbjct 686 ACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTCTTGCCAGTCAAAGTC 627 Query 211098 TTTACAAA 211105 || || || Sbjct 626 TTGACGAA 619 >seq14708 Length=579 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | || || ||||||| |||||| || || | | || ||||| Sbjct 220 TCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGTTCTTCC 161 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||| || || ||||| || || | | ||| ||||| |||| ||||| || Sbjct 160 ATCTTCTAACTGTTTACCAGCGAATATGAGTCTCTATTGATCAGGTGGAATACCTTCTTT 101 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| ||||||| |||||| || || ||||| || || || || || | || || Sbjct 100 GTCCTAGATCTTTGCTTTCACATTCTCAATGGTATCTGATGGCTCTACGTCCAAGGTAAT 41 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| || ||||| || || || | || ||| Sbjct 40 GGTCTTTCCAGTAAGAGTTTTAACGAAGATCTACAT 5 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || || |||||||| || | | || ||||||||||| |||| || ||| Sbjct 429 GTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCTTCAAGCTATTTTCCT 370 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | | || ||| || || |||| |||||||| || | ||| ||| ||| Sbjct 369 GCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTATCTTAGATTTTTGCTTTA 310 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || |||||||| ||||| || | ||| || |||||||| || | || Sbjct 309 ACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATGGTCTTTCCAGTTAATGTT 250 Query 211098 TTTACAAACACCTGCAT 211114 || || || | || ||| Sbjct 249 TTAACGAAGATCTACAT 233 >seq11541 Length=746 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | || || ||||||| |||||| || || | | || ||||| Sbjct 370 TCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGTTCTTCC 311 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| ||||| || || ||||| || || | | ||| || || || | || ||||| Sbjct 310 ATCTTCTAGCTGTTTTCCAGCGAATATGAGTCTCTATTGATCGGGTGGGATGCCCTCCTT 251 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| ||||| ||| |||||||| || || || ||| ||||| || | ||||| Sbjct 250 GTCCTAAATCTTAGCTTTGACGTTTTCAATTGTATCTGAGGGCTCAACATCTAAGGTGAT 191 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || ||||| || || || || | | |||||| Sbjct 190 AGTTTTGCCAGTGAGTGTTTTAACGAAAATTTACATTTT 152 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || || |||||||| || | | || ||||||||||| |||| || ||| Sbjct 579 GTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCTTCAAGCTATTTTCCT 520 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | | || ||| || || |||| |||||||| || | ||| ||| ||| Sbjct 519 GCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTATCTTAGATTTTTGCTTTA 460 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || |||||||| ||||| || | ||| || |||||||| || | || Sbjct 459 ACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATGGTCTTTCCAGTTAATGTT 400 Query 211098 TTTACAAACACCTGCAT 211114 || || || | || ||| Sbjct 399 TTAACGAAGATCTACAT 383 >seq3088 Length=519 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || || |||||||| || | | || ||||||||||| |||| || ||| Sbjct 352 GTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCTTCAAGCTATTTTCCT 293 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | | || ||| || || || | || || ||||||| ||||| |||| Sbjct 292 GCAAAGATCAATCTTTATTGATCGGGTGGGATGCCCTCTTTGTCCTAAATCTTAGCTTTC 233 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 |||||||| || || || ||| ||||| || | ||||| || || || ||||| || Sbjct 232 ACGTTTTCAATTGTATCTGAGGGCTCAACATCTAAGGTGATAGTTTTGCCAGTGAGTGTT 173 Query 211098 TTTACAAACACCTGCATTTT 211117 || || || | | |||||| Sbjct 172 TTAACGAAAATTTACATTTT 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158851343501060