Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3091 178 3e-39 seq3090 178 3e-39 seq3089 178 3e-39 seq14708 140 8e-28 seq11541 134 3e-26 seq2151 95.1 3e-14 >seq3091 Length=1223 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | |||||||| || || ||||||| |||||| || | |||||| || Sbjct 825 TCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCC 766 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| || || || |||||||| || |||| |||||| ||||| |||||||||||||| Sbjct 765 ATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTT 706 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| | |||||| ||| || ||||||||||||||||| ||| || || | ||||| Sbjct 705 GTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGAT 646 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||||||||| | ||| | |||||| Sbjct 645 GGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 610 Score = 161 bits (178), Expect = 2e-34 Identities = 175/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||||| || || |||||||| || || || | || |||||||||| | ||||| Sbjct 372 AAGTCTCAAAACTAGATGGAGAGTAGACTCCTTCTAGATGTTGTAATCGGAGAGGGTTCT 313 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| | ||||| ||||||||||| |||| |||||| ||||| || |||||||| Sbjct 312 GCCATCTTCCAATTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGAGGGATACCTTC 253 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||||||||||||||| ||| || || ||||||||||| | || ||||| || || Sbjct 252 CTTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGT 193 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATGGTTACTT 225726 || ||||| || || || || || | ||| | | ||| || || || ||| Sbjct 192 AATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCTT 141 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||| || | |||||| || || || || | || ||||| ||| ||| ||||| Sbjct 599 AGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTG 540 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| || || || || || ||||| |||| |||||| ||||| || || |||||| Sbjct 539 CCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCC 480 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||||||||| |||||| || || |||||||| | ||| ||||| | ||| Sbjct 479 TTATCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCTGATGGTTCAACGTCGAGAGTG 420 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || | || || | ||| | || ||| Sbjct 419 ATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 382 >seq3090 Length=995 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | |||||||| || || ||||||| |||||| || | |||||| || Sbjct 597 TCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCC 538 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| || || || |||||||| || |||| |||||| ||||| |||||||||||||| Sbjct 537 ATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTT 478 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| | |||||| ||| || ||||||||||||||||| ||| || || | ||||| Sbjct 477 GTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGAT 418 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||||||||| | ||| | |||||| Sbjct 417 GGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 382 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||| || | |||||| || || || || | || ||||| ||| ||| ||||| Sbjct 371 AGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTG 312 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| || || || || || ||||| |||| |||||| ||||| || || |||||| Sbjct 311 CCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCC 252 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||||||||| ||| || || ||||||||||| | || ||||| || || Sbjct 251 TTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGTA 192 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATGGTTACTT 225726 || ||||| || || || || || | ||| | | ||| || || || ||| Sbjct 191 ATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCTT 141 >seq3089 Length=958 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | |||||||| || || ||||||| |||||| || | |||||| || Sbjct 597 TCTGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTGTAGTCACTTAGAGTTCTTCC 538 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| || || || |||||||| || |||| |||||| ||||| |||||||||||||| Sbjct 537 ATCTTCGAGTTGTTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTT 478 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| | |||||| ||| || ||||||||||||||||| ||| || || | ||||| Sbjct 477 GTCCTAGATCTTGGCCTTGACGTTTTCGATGGTGTCTGAGGGTTCAACATCAAGAGTGAT 418 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||||||||| | ||| | |||||| Sbjct 417 GGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 382 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||| || | |||||| || || || || | || ||||| ||| ||| ||||| Sbjct 371 AGTCTCAACACTAAGTGGAGGGTTGACTCCTTCTAGATGTTGTAGTCGCTCAAGGTTCTG 312 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| || || || || || ||||| |||| |||||| ||||| || || |||||| Sbjct 311 CCATCTTCAAGTTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCGGGTGGGATGCCTTCC 252 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||||||||| ||| || || ||||||||||| | || ||||| || || Sbjct 251 TTGTCTTGGATCTTAGCCTTGACGTTCTCAATGGTGTCTGATGGCTCTACGTCCAATGTA 192 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATGGTTACTT 225726 || ||||| || || || || || | ||| | | ||| || || || ||| Sbjct 191 ATGGTCTTACCGGTTAAGGTCTTAACGAAAATCTACATGTTTTGTTTTCTT 141 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| ||||| | || || || | || ||||| |||||||| || || || ||| Sbjct 806 GTTGATTCCTTTTGAATGTTATAGTCAGATAATGTTCTTCCATCTTCAAGTTGTTTACCA 747 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | || || ||| ||||| || ||||| ||||| ||||| ||||| ||| Sbjct 746 GCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTTGAATCTTGGCCTTG 687 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| || |||||||| || | || || || | ||||| |||||||| |||||||| Sbjct 686 ACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTCTTGCCAGTCAAAGTC 627 Query 225697 TTTATGAACACTTGCATT 225714 || | ||| | || |||| Sbjct 626 TTGACGAAGATTTACATT 609 >seq14708 Length=579 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | || |||||||||| || ||||| || | || ||||| || Sbjct 220 TCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGTTCTTCC 161 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||| || |||||||| || |||| | ||| || || ||||||||||| || Sbjct 160 ATCTTCTAACTGTTTACCAGCGAATATGAGTCTCTATTGATCAGGTGGAATACCTTCTTT 101 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| | ||||||| |||||| || ||||| ||||| | || ||||| || || || Sbjct 100 GTCCTAGATCTTTGCTTTCACATTCTCAATGGTATCTGATGGCTCTACGTCCAAGGTAAT 41 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || || | |||||| | ||| Sbjct 40 GGTCTTTCCAGTAAGAGTTTTAACGAA 14 Score = 118 bits (130), Expect = 3e-21 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| || || | || || || | |||||||| |||||||| |||| || || Sbjct 429 GTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCTTCAAGCTATTTTCCT 370 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || ||||| | || || ||| ||||| |||||||||||||| |||| ||| |||||| || Sbjct 369 GCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTATCTTAGAT-TTTTGCTTT 311 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| || ||||| || | || || ||||| || || ||||| || || || || Sbjct 310 AACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATGGTCTTTCCAGTTAATGT 251 Query 225696 TTTTATGAA 225704 ||| | ||| Sbjct 250 TTTAACGAA 242 >seq11541 Length=746 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | || |||||||||| || ||||| || | || ||||| || Sbjct 370 TCTCAAGACTAAGTGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGTTCTTCC 311 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||||||| || |||||||| || |||| | ||| ||||| || || || ||||| Sbjct 310 ATCTTCTAGCTGTTTTCCAGCGAATATGAGTCTCTATTGATCGGGTGGGATGCCCTCCTT 251 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| | ||||| || || ||| || || ||||||| || || ||||| ||||| Sbjct 250 GTCCTAAATCTTAGCTTTGACGTTTTCAATTGTATCTGAGGGCTCAACATCTAAGGTGAT 191 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||| || | ||||| | ||| | || |||||| Sbjct 190 AGTTTTGCCAGTGAGTGTTTTAACGAAAATTTACATTTT 152 Score = 118 bits (130), Expect = 3e-21 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| || || | || || || | |||||||| |||||||| |||| || || Sbjct 579 GTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCTTCAAGCTATTTTCCT 520 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || ||||| | || || ||| ||||| |||||||||||||| |||| ||| |||||| || Sbjct 519 GCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTATCTTAGAT-TTTTGCTTT 461 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| || ||||| || | || || ||||| || || ||||| || || || || Sbjct 460 AACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATGGTCTTTCCAGTTAATGT 401 Query 225696 TTTTATGAA 225704 ||| | ||| Sbjct 400 TTTAACGAA 392 >seq2151 Length=2031 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || | ||| |||||||||||||| ||||| || || ||||||||||| |||||||| Sbjct 1405 GAAGATCTAACCGTCAGTAATAGAGATCACATTAGTGGGAATATAAGCAGACACATCACC 1346 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 ||||| ||||| | ||| || | || || || || |||||||| Sbjct 1345 AGCTTGGGTTTCAATAACTGGAAGAGCAGTGAGGGAACCACCACC 1301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192221885729336