Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq12968 168 6e-37 >seq12968 Length=2778 Score = 168 bits (186), Expect = 6e-37 Identities = 571/875 (65%), Gaps = 21/875 (2%) Strand=Plus/Plus Query 4272 ACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAAC 4331 |||| ||| || ||||| || || |||||| || ||||| ||||||| | ||||| Sbjct 172 ACTCTCTTCTCAAAGAAGTTTGTCTTGCCTGGTAGTGAAATCATTTCCATCCACTCAAAT 231 Query 4332 GGATTAGTTGCGTTGTAATGTTTTTCACACTT-TAGAGCTACAAGCAATCGGTCAGCTAC 4390 ||||| | ||||| | || ||| || ||| | || | || ||||| || Sbjct 232 GGATTTAACACATTGTAGTACTTAGGT-ACTCCTAAAGCAAAGAGTAGTCTATCAGCCAC 290 Query 4391 AAATTCTATATACTGGCTCATGA-GTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCG 4449 ||||| |||||| || ||| | ||| | | || || ||||| | | || || || | Sbjct 291 AAATTATATATATTGAGCCATTAAGTTAGAA-TTCATACCAATAAGTTCAACTGGGAGAG 349 Query 4450 CGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTAT 4509 | | | ||||||| ||| || ||| || | || || || || ||| | | Sbjct 350 CTGAGCATACAAACTCTAATTCAATTTATACAGCATTTGAAATAATCTCCAAAATTCTTT 409 Query 4510 CTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAAC 4569 | |||||| ||||| ||||| | | | | |||||| ||||||||| |||| | Sbjct 410 CATTAGATATCTTATTATTTAAGTGTTTATAGAGTAAACATGCAAAATCAGTGTGCATGC 469 Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTT 4629 |||| |||||||| || ||||| ||| || || | || |||||||| || | ||| | Sbjct 470 CTTCATCTCTGCTTATGAGTTCATTACTGAATGTCAGACCAGGCATTAATCCGCGCTTCT 529 Query 4630 TAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACG 4689 | | ||| || ||||| ||||| || || || || || ||||| | || || || | Sbjct 530 TCATCCAGAAGATAGCACAGAATGAGCCTGAGAAAAAGATACCTTCAATAGCAGCGAATG 589 Query 4690 CTACTAATC----GGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAG 4745 ||||||||| || | ||| | ||| | || ||||||||||| ||||| Sbjct 590 CTACTAATCTTTCGGCATAGGAATTATCTGA----GCCT---ATCCATTTTAAGGCCCAT 642 Query 4746 TTAGCTTTTTTCTTAACGCACGGAATTGTGTAT-ATAGCGTTAAATAATTTACTTTTT-T 4803 | || ||||| ||| |||||| || | | || || ||||| || | | ||| | Sbjct 643 TCGGCCTTTTTAGCAACAACCGGAAT-GTTTGTGATTGCTTTAAA-AAGGAAGTCTTTAT 700 Query 4804 CAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTT 4863 | |||| || || || || || || || || || | || || || || || | Sbjct 701 CTTATGGATCAGTGATGTAGGTATCAATGAGAAGAGAGTAGGTCTCTGAGTGAATGTTCT 760 Query 4864 CTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAA 4923 | || || | ||||||||||||||||||||| || | | || | ||| | || | Sbjct 761 CCATCATCATTTAAAATCCGTAAAAGCATCTAGCCTCAGGAATTTAGATTTCAGTGCAGA 820 Query 4924 ATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACAT 4983 | |||| | || || || ||||| || ||||| || || ||||| || | ||||| Sbjct 821 ACCTTTAAGCCAAATTCTCAAGAACTATTCCATCACTAGCAGCGAAAAAGGCAAGAACAT 880 Query 4984 GAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTA 5043 | ||||||| | ||| || || ||||||| ||||| | ||| ||| || Sbjct 881 GCTTAATAAAGTGTTTTTCACCATCGTTGAGTTTTTCCCAGTCTTTAACATCAGTAGCTA 940 Query 5044 AATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATAT 5103 | || | ||| ||| ||||||| || | || | ||||||||| ||| |||| Sbjct 941 AGTCTATTTCCTCAGCAGTCCAGAAGCAAGCCATTTAATCTTTGTACATCTTCCATATAT 1000 Query 5104 CAGGATA-CTGAATCGGAAGTATGACAAATCTGTT 5137 || || ||| || || | ||| ||||| | ||| Sbjct 1001 CATTGTATCTG-ATGGGTAATATTACAAAGCGGTT 1034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426944236721252