Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq12968 307 2e-78 seq13015 293 3e-74 >seq12968 Length=2778 Score = 307 bits (340), Expect = 2e-78 Identities = 608/892 (68%), Gaps = 12/892 (1%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||| ||||| || || | ||||| || || || || |||||| | ||| || || Sbjct 157 TTTTAATATTCCCCGACTCTCTTCTCAAAGAAGTTTGTCTTGCCTGGTAGTGAAATCATT 216 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| | ||||| ||||| ||||| || || | |||||| | | | Sbjct 217 TCCATCCACTCAAATGGATTTAACACATTGTAGTACTTAGGTACTCCTAAAGCAAAGAGT 276 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 |||||||| || || |||| |||||| ||| | | | ||||||| || || ||| Sbjct 277 AGTCTATCAGCCACAAATTATATATATTGAGCCATTAAGTTAGAATTCATACCAATAAGT 336 Query 46519 TTGACCGGTAGAGCCTCCGTA-AGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 | || || ||||| | | | | ||||||| |||||| ||||||| || || || Sbjct 337 TCAACTGGGAGAGC-TGAGCATACAAACTCTAATTCAATTTATACAGCATTTGAAATAAT 395 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | | | |||| | | | || | || |||||| | | |||||||||||| Sbjct 396 CTCCAAAATTCTTTCATTAGATATCTTATTATTTAAGTGTTTATAGAGTAAACATGCAAA 455 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 |||| || | |||||||||||| || || | ||| ||| ||||| || |||||||| Sbjct 456 ATCAGTGTGCATGCCTTCATCTCTGCTTATGAGTTCATTACTGAATGTCAGACCAGGCAT 515 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 || ||| ||||| || | ||| || ||||| ||| || || || || || || ||||| Sbjct 516 TAATCCGCGCTTCTTCATCCAGAAGATAGCACAGAATGAGCCTGAGAAAAAGATACCTTC 575 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA----ATCCACC 46813 | ||| |||||||| || | ||| || | || || || || ||| ||||| Sbjct 576 AATAGCAGCGAATGCTACTAATCTTTCGGCATA---GGAATTATC-TGAGCCTATCCATT 631 Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCT-ATAGCATTAAAGAGA 46872 || ||||| || |||||||| ||| || || |||| | || || ||||| || Sbjct 632 TTAAGGCCCATTCGGCCTTTTTAGCAACAACCGGAAT-GTTTGTGATTGCTTTAAAAAGG 690 Query 46873 AAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAA 46932 |||| ||| || | ||| | | || ||||| || | |||| || | ||||| Sbjct 691 AAGTCTTTATCTTATGGATCAGTGATGTAGGTATCAATGAGAAGAGAGTAGGTCTCTGAG 750 Query 46933 TGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACC 46992 |||||||| || || ||| | |||||||||||| ||||| || |||| ||| | | Sbjct 751 TGAATGTTCTCCATCATCATTTAAAATCCGTAAAAGCATCTAGCCTCAGGAATTTAGATT 810 Query 46993 TCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAAT 47052 || || || || | || || |||||||||| |||||||||||||||||||| ||||| Sbjct 811 TCAGTGCAGAACCTTTAAGCCAAATTCTCAAGAACTATTCCATCACTAGCAGCGAAAAAG 870 Query 47053 GCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATA 47112 || | ||||| |||||||| | ||||||| | | ||||| | |||||| || | | Sbjct 871 GCAAGAACATGCTTAATAAAGTGTTTTTCACCATCGTTGAGTTTTTCCCAGTCTTTAACA 930 Query 47113 TCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATA 47172 || | | || |||| ||| ||||| |||||||| | ||| | | ||| ||||| Sbjct 931 TCAGTAGCTAAGTCTATTTCCTCAGCAGTCCAGAAGCAAGCCATTTAATCTTTGTACATC 990 Query 47173 TTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224 |||||||||||| ||| ||| || || || ||||| | || ||||||| Sbjct 991 TTCCATATATCATTGTATCTGATGGGTAATATTACAAAGCGGTTAGGATTTT 1042 >seq13015 Length=2880 Score = 293 bits (324), Expect = 3e-74 Identities = 989/1517 (65%), Gaps = 41/1517 (3%) Strand=Plus/Minus Query 75696 CTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAA 75755 |||| | ||||| || ||||| | ||| || |||| |||||| |||| ||||| | Sbjct 2216 CTCTCACTAGATGTGGGTTAACGCATACAAACTCACCAGCCAATACCCTTCTTGTGTAGA 2157 Query 75756 TATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAG 75815 ||| |||| || ||||| | ||||||||||| || || ||||| | |||||| |||| Sbjct 2156 CATTGGTGGTGTAGGGTTCAAAGGATTCATTGTTCCCTAATATTTGTGAAGTTGATGCAG 2097 Query 75816 TCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTA 75875 | |||||||| || || | | | || | | ||| ||| | | || | | ||| Sbjct 2096 TTGGCATAGGAGCAACTAGGAGAGAGTTACGGGCACCGTGTTACATAACTTCCTATCTTA 2037 Query 75876 GATATTTCCAATCCCAAAGATCTGATGGTACAA-------CATCCCAGAGATCGTATTGT 75928 | || |||||| | | || | ||| || ||| ||| ||||| ||| Sbjct 2036 GTGTTTACCAATC----ATACCTTGTAGTATAAGGTTCTTCATTCCATAGATCAAATT-- 1983 Query 75929 AGAATT--CCGTTGCT-AGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCA 75985 |||||| || || || || | || || | ||||||| |||| || || | || | Sbjct 1982 AGAATTTTCCTTTACTGAGTGGA-GAACCTTAGAATGTTTCATAAGGGCCCTCTTCTTTA 1924 Query 75986 GCTAGTTCGCA---ACTC--GCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCT 76040 ||||||| | | | || || || || ||| | |||||| || || || ||||||| Sbjct 1923 GCTAGTT-GAATTGATTCAAGCATCGAA-GCA---TGATAAATGGTCTCAAATATCTTCT 1869 Query 76041 TATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATA-AATGCATCT 76099 | || | ||| |||||| ||||| | | ||| | | | || || | ||| Sbjct 1868 TGTTCAAATCAGCAGCTTCATCTGATTCAAATGCA-AATTTCAGTAATTAGAAAGTATCA 1810 Query 76100 GCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCT 76159 |||||||||| ||| || |||||||||||||| || | ||| || |||| |||||| Sbjct 1809 GCTAGTCCCTAAACACCTATACCAATAGGTCTGTGACGGAGATTAGATTTTTCGGCTTCT 1750 Query 76160 GGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACC 76219 | ||||| | || | ||| || || || || | ||| | | ||| | | Sbjct 1749 TCTACTGGGTAGAAGTTGACATCAATGATCTTGTTTAAATTGCGAGTTATTACACGAGTC 1690 Query 76220 ACGTCCTTTAGTTTGAGAAAATCAAA--TTTTCCAT-CTAT---CACAAACATATTAAGA 76273 || || | ||| | | ||||||| | | | || || | |||| | || |||| Sbjct 1689 ACTTCATGGAGTCTTTCATAATCAAAGGTCTACGATTCTTTGTTCACATATCTAGGAAGA 1630 Query 76274 GCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCC 76333 | ||| || || ||||||||||| || | |||| | | |||| | ||| || Sbjct 1629 GATATTGAGGCGAGATTACAAACAGCAATTTCATCTGGGGATGTGTATTCGACTATTTCA 1570 Query 76334 GTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACAT 76393 ||| || || | || || || || | || | || ||| ||||| || || Sbjct 1569 CAGCAAAGGTTGGATGATTTTATTGTACCTAAATGCTATTAGTTTGATTTTTTATTGCAC 1510 Query 76394 GAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTC 76453 | || ||||| || | | ||||| |||||||| || ||||| ||||||| || | Sbjct 1509 GCATCTTTATAGAGCATGTATGGAGTGCCAGTTTCTTGTTGAGATTCAATAATAGCTTCC 1450 Query 76454 CAGACGACTCTAG-CTTTTATTATAGATTTGTA-TCGCTTCTCTCTTTCATATTGTGTAT 76511 || | | | ||| |||| || | |||| | || | ||| | ||||| | | || Sbjct 1449 CAAA-GTTTTTAGGCTTTGATAACTTTTTTGCCCTTGCCT-TCTTTCTCATACTTTTCAT 1392 Query 76512 ATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACA 76571 | | | ||||||||| ||||| ||||||| | || || || ||||| ||||| | Sbjct 1391 AAAGCTTTTCAAATTCCTCTCCAAAAACATCTTGTAAGCCGGGTGCCTCATTAGGACAGA 1332 Query 76572 TCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAG 76631 | || ||| || |||| ||| || | |||||||| ||||| || | ||||| || Sbjct 1331 AAAGTGTCCAATCTCCATTAGACTTCACTCTATTCATAAATAGATCTGGCACCCATAAAG 1272 Query 76632 CAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGA 76691 || ||| ||||||| | ||| ||| || || || ||||| || | || | Sbjct 1271 CATAAAAGAGATCTCTAGCTCTTTATTCCTCTTTACCGTGGTTCTTCTTCATCATAAGAA 1212 Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 | || | || ||||| |||||| ||||||||||| || || | ||| | |||| Sbjct 1211 AATCGAAAACATCAGCATGCCAAGGTTCTAGATAAATGGCAAAGGAACCTTTCCTTTTAC 1152 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 ||| || || || | |||||| ||||| | ||| |||| | ||||||||||| | || Sbjct 1151 CACCACCTTGGTCAACATATCTAGCAGTTTCATTGAAAACCTTTAACATTGGAATTAAGC 1092 Query 76812 CGTTAGATGTA-CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATA 76870 | ||||| ||| ||||| || || ||||||| || | || | ||| | ||| Sbjct 1091 CATTAGA-GTAGCCATTAGTGCCTTTAATATAAGAGCCTGAAGCTCTTATACAATGAATT 1033 Query 76871 GATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAG 76930 || || || ||||| || || ||||| |||| |||| || | | || || ||| Sbjct 1032 GAAAGTCCAATTCCACCAGCTGACTTAGATATTAAAGCAGTTTGTCTAAGAGTATCGTAG 973 Query 76931 ATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGA 76990 || || | ||| ||| || |||| | | ||| ||||| |||||||| | | Sbjct 972 ATACCTTGTATTGAATCGTCTTTCATAGTCAAAAGGAAACATGAAGACATTTATGGCTTG 913 Query 76991 ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGA 77050 || || | || || || ||||||| |||||||| |||||||| || || | || | Sbjct 912 GGTGTACCAGAGTTGAATAAAGTAGGAGTGGCATGAGTAAACCATTTATCTGACATTAAA 853 Query 77051 TTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATC 77110 | || ||||||||| || | || ||| || || ||||||| | || | |||| Sbjct 852 TGATAAGTTTCAATAGCTCTCTTTACATCATTTTTGTGGATTCCTATGGATACTCTCATC 793 Query 77111 AACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCC 77170 ||||| | ||||||||||| || | || || | ||| | || || || || || Sbjct 792 AACATTTATTGAGGTCGTTCAACGATTTTTCCATGAACTTTGAGTAAATAGGACTTCTCT 733 Query 77171 AAAGTTTTAAAACCAAA 77187 || |||||||| ||||| Sbjct 732 AAGGTTTTAAAGCCAAA 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712753991950080