Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3091 136 8e-27 seq3090 129 1e-24 seq3089 129 1e-24 seq14708 113 9e-20 seq11541 113 9e-20 seq3088 91.5 3e-13 >seq3091 Length=1223 Score = 136 bits (150), Expect = 8e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || || | |||||||||||| |||| || | |||||| || |||||||| |||||||| Sbjct 572 TCCTTCTAGATGTTGTAGTCGCTCAAG-GTTCTGCCATCTTCAAGTTGTTTTCCGGCAAA 514 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||| || || || || ||||| ||||||||||| || || ||| | Sbjct 513 GATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTATCTTGGATCTTGGCCTTCACGTT 454 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | ||| || ||||||||||| ||||| || || | |||||||| Sbjct 453 CTCAATAGTGTCTGATGGTTCAACGTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAAC 394 Query 283088 GAATATCTGCAT 283099 ||| || | ||| Sbjct 393 GAAGATTTACAT 382 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||| ||||| | || || | ||||| || | ||| || || || ||| Sbjct 1028 TCCTTTTGGATGTTATAGTCGGATAGAGTTCTTCCATCTTCCAATTGCTTTCCTGCGAAG 969 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || ||| || || ||||||||||| ||||| ||||| || || || | Sbjct 968 ATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTTGAATCTTGGCCTTGACATTC 909 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | || || || || ||||| ||||| || ||||||||||| ||| Sbjct 908 TCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACG 849 Query 283089 AATATCTGCATT 283100 || || | |||| Sbjct 848 AAGATTTACATT 837 Score = 116 bits (128), Expect = 8e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || | ||||||||| || | || || | |||||| || | ||| || || || ||| Sbjct 344 TCCTTCTAGATGTTGTAATCGGAGAGGGTTCTGCCATCTTCCAATTGCTTGCCAGCGAAG 285 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | |||||| || || ||||| ||||||||||||||||| || || ||| | Sbjct 284 ATGAGTCTTTGTTGATCGGGAGGGATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTTC 225 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | || || || | || || |||||||| || || ||||||||| Sbjct 224 TCAATGGTGTCTGATGGCTCTACGTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAACG 165 Query 283089 AATATCTGCATTTT 283102 || |||| ||| || Sbjct 164 AAAATCTACATGTT 151 >seq3090 Length=995 Score = 129 bits (142), Expect = 1e-24 Identities = 147/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || || | |||||||||||| |||| || | |||||| || |||||||| |||||||| Sbjct 344 TCCTTCTAGATGTTGTAGTCGCTCAAG-GTTCTGCCATCTTCAAGTTGTTTTCCGGCAAA 286 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||| || || || || ||||||||||||||||| || || ||| | Sbjct 285 GATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTAGCCTTGACGTT 226 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | || || || | || || |||||||| || || |||||||| Sbjct 225 CTCAATGGTGTCTGATGGCTCTACGTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAAC 166 Query 283088 GAATATCTGCATTTT 283102 ||| |||| ||| || Sbjct 165 GAAAATCTACATGTT 151 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||| ||||| | || || | ||||| || | ||| || || || ||| Sbjct 800 TCCTTTTGGATGTTATAGTCGGATAGAGTTCTTCCATCTTCCAATTGCTTTCCTGCGAAG 741 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || ||| || || ||||||||||| ||||| ||||| || || || | Sbjct 740 ATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTTGAATCTTGGCCTTGACATTC 681 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | || || || || ||||| ||||| || ||||||||||| ||| Sbjct 680 TCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACG 621 Query 283089 AATATCTGCATT 283100 || || | |||| Sbjct 620 AAGATTTACATT 609 >seq3089 Length=958 Score = 129 bits (142), Expect = 1e-24 Identities = 147/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || || | |||||||||||| |||| || | |||||| || |||||||| |||||||| Sbjct 344 TCCTTCTAGATGTTGTAGTCGCTCAAG-GTTCTGCCATCTTCAAGTTGTTTTCCGGCAAA 286 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||| || || || || ||||||||||||||||| || || ||| | Sbjct 285 GATGAGTCTTTGTTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTAGCCTTGACGTT 226 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | || || || | || || |||||||| || || |||||||| Sbjct 225 CTCAATGGTGTCTGATGGCTCTACGTCCAATGTAATGGTCTTACCGGTTAAGGTCTTAAC 166 Query 283088 GAATATCTGCATTTT 283102 ||| |||| ||| || Sbjct 165 GAAAATCTACATGTT 151 Score = 129 bits (142), Expect = 1e-24 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 282890 TACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTC 282949 ||| | ||| || || ||| ||||| ||||| ||||||| | || | ||||| || Sbjct 819 TACTAAATGCAAGGTTGATTCCTTTTGAATGTTATAGTCAGATAATGTTCTTCCATCTTC 760 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 |||||||| || || |||||||| | || ||| || || ||||||||||| ||||| Sbjct 759 AAGTTGTTTACCAGCGAAGATCAATCTTTATTGATCGGGTGGGATACCCTCCTTATCTTG 700 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| || || || | || || ||||| || | || || || || ||||| ||||| Sbjct 699 AATCTTGGCCTTGACATTCTCAATGGTGTCAGATGGCTCAACATCAAGGGTGATGGTCTT 640 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||||||||| ||||| || | |||| Sbjct 639 GCCAGTCAAAGTCTTGACGAAGATTTACATT 609 >seq14708 Length=579 Score = 113 bits (124), Expect = 9e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 282890 TACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTC 282949 ||| | ||| || || ||| || || ||||| ||||||| | || | ||||| || Sbjct 442 TACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCTTC 383 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 || | ||| || ||||||||||| | || ||| || |||||||| ||||| |||| Sbjct 382 AAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTATCTTA 323 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||| |||||||| || | || || ||||| || | || || || | ||| || ||||| Sbjct 322 GATTTTTGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATGGTCTT 263 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || |||||||| |||| ||| Sbjct 262 TCCAGTTAATGTTTTAACGAAGATCTACAT 233 Score = 100 bits (110), Expect = 6e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| || |||||||| |||||||||||| | | || | ||||| |||| ||| Sbjct 207 TGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGTTCTTCCATCTTCTAACTGT 148 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || || || || | | | ||| ||| |||||||| || ||||| | ||||||| Sbjct 147 TTACCAGCGAATATGAGTCTCTATTGATCAGGTGGAATACCTTCTTTGTCCTAGATCTTT 88 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| || | || || || || || | || || || | || || ||||| || || Sbjct 87 GCTTTCACATTCTCAATGGTATCTGATGGCTCTACGTCCAAGGTAATGGTCTTTCCAGTA 28 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 | ||| |||||||| |||| ||| Sbjct 27 AGAGTTTTAACGAAGATCTACAT 5 >seq11541 Length=746 Score = 113 bits (124), Expect = 9e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 282890 TACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTC 282949 ||| | ||| || || ||| || || ||||| ||||||| | || | ||||| || Sbjct 592 TACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCTTC 533 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 || | ||| || ||||||||||| | || ||| || |||||||| ||||| |||| Sbjct 532 AAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGGAATACCTTCCTTATCTTA 473 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||| |||||||| || | || || ||||| || | || || || | ||| || ||||| Sbjct 472 GATTTTTGCTTTAACATTTTCAATTGTGTCAGATGGCTCAACATCTAAAGTAATGGTCTT 413 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || |||||||| |||| ||| Sbjct 412 TCCAGTTAATGTTTTAACGAAGATCTACAT 383 Score = 93.3 bits (102), Expect = 9e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| || |||||||| |||||||||||| | | || | ||||| ||||| ||| Sbjct 357 TGTAATGTAGATTCTTTTTAGATGTTGTAGTCTGATAATGTTCTTCCATCTTCTAGCTGT 298 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || || || || | | | ||| || || || ||||||||||| | ||||| Sbjct 297 TTTCCAGCGAATATGAGTCTCTATTGATCGGGTGGGATGCCCTCCTTGTCCTAAATCTTA 238 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| ||| | || || || || || | || || || | ||||| || || || || Sbjct 237 GCTTTGACGTTTTCAATTGTATCTGAGGGCTCAACATCTAAGGTGATAGTTTTGCCAGTG 178 Query 283077 AAAGTCTTAACGAATATCTGCATTTT 283102 | || |||||||| || | |||||| Sbjct 177 AGTGTTTTAACGAAAATTTACATTTT 152 >seq3088 Length=519 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 282890 TACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTC 282949 ||| | ||| || || ||| || || ||||| ||||||| | || | ||||| || Sbjct 365 TACTAAATGCAAGGTTGATTCCTTCTGAATGTTATAGTCAGATAAAGTTCTTCCATCTTC 306 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 || | ||| || ||||||||||| | || ||| || || || ||||| ||||| | Sbjct 305 AAGCTATTTTCCTGCAAAGATCAATCTTTATTGATCGGGTGGGATGCCCTCTTTGTCCTA 246 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| ||||| ||| | || || || || || | || || || | ||||| || || Sbjct 245 AATCTTAGCTTTCACGTTTTCAATTGTATCTGAGGGCTCAACATCTAAGGTGATAGTTTT 186 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || | || |||||||| || | |||||| Sbjct 185 GCCAGTGAGTGTTTTAACGAAAATTTACATTTT 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046467700711576