Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq12968 226 3e-54 seq1030 84.2 2e-11 >seq12968 Length=2778 Score = 226 bits (250), Expect = 3e-54 Identities = 595/888 (67%), Gaps = 29/888 (3%) Strand=Plus/Plus Query 23218 TTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276 |||| ||||||||| || | |||| || || || |||||||| || || ||| || | Sbjct 157 TTTTAATATTCCCCGACTC-TCTTCTCAAAGAAGTTTGTCTTGCCTGGTAGTGAAATCAT 215 Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATTATA-TACAGCTTTACATGATAATTCCTTTA 23335 |||||| | ||||||||||| | ||| || ||| ||| | ||| | | Sbjct 216 TTCCATCCACTCAAATGGATTTAACACATTGTAGTACTTAGGTAC-TCCTAAAGCAAAGA 274 Query 23336 AAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTA 23395 || ||||| || ||||||| ||||||||| ||| || | | | || ||||| || | Sbjct 275 GTAGTCTATCAGCCACAAATTATATATATTGAGCCATTAAGTTAGAATTCATACCAATAA 334 Query 23396 GTTTTACTGGAATCGC--ATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAAT 23453 ||| ||||| | || | |||| || | | |||||| | ||||||| | ||| Sbjct 335 GTTCAACTGGGAGAGCTGAGCATACAA--ACTCTAATTCAATTTATACAGCATTTGAAAT 392 Query 23454 TATTTGAACAATAACTTCTTCACTAGGTGGAT-ATT--TTAAATACTTAAACAATAAACA 23510 || | | ||| ||| ||| ||| | | ||| |||| | ||| | | |||||| Sbjct 393 AATCTCCAAAATT-CTT--TCATTAGATATCTTATTATTTAAGTGTTTATAGAGTAAACA 449 Query 23511 TGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCC 23570 |||||||||| || | ||||||||| || || || | ||||||| ||||| | || Sbjct 450 TGCAAAATCAGTGTGCATGCCTTCATCTCTGCTTATGAGTTCATTACTGAATGTCAGACC 509 Query 23571 TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAAT 23630 ||||||||||| || || || ||||| || || ||| ||||| || || || || || Sbjct 510 AGGCATTAATCCGCGCTTCTTCATCCAGAAGATAGCACAGAATGAGCCTGAGAAAAAGAT 569 Query 23631 ACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA-A 23689 ||| |||| ||| || || || || | | | || | | ||||| | || | Sbjct 570 ACCTTCAATAGCAGCGAATGCTACTAATCTTTCGGCATAGGA---ATTATC-TGAGCCTA 625 Query 23690 TCCAtttttttGTCCAATTAGCCTTCAATTTTACAC--ACTCAATTGTTTCA-ATTGCTT 23746 |||||||| | ||| | ||||| ||| || || | ||||| ||||||| Sbjct 626 TCCATTTTAAGGCCCATTCGGCCTT---TTTAGCAACAACCGGAATGTTTGTGATTGCTT 682 Query 23747 TTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACA 23806 | || || || ||| |||| ||| || || || |||||||| || | | || Sbjct 683 TAAAAAGGAAGTCTTTATCTTATGGATCAGTGATGTAGGTATCAATGAGAAGAGAGTAGG 742 Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866 | || || ||||| || || || || | ||| || ||||| |||||||| |||| | Sbjct 743 TCTCTGAGTGAATGTTCTCCATCATCATTTAAAATCCGTAAAAGCATCTAGCCTCAGGAA 802 Query 23867 ATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAG 23926 || | ||| | | || |||| ||| ||||| || ||| || ||||||||||||| Sbjct 803 TTTAGATTTCAGTGCAGAACCTTTAAGCCAAATTCTCAAGAACTATTCCATCACTAGCAG 862 Query 23927 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GTTGATAATTTTTTCCA 23984 | || || |||||||||| || ||||| ||| ||||| || |||| | ||||| ||| Sbjct 863 CGAAAAAGGCAAGAACATGCTTAATAAAGTGTTTTTCACCATCGTTG--AGTTTTTCCCA 920 Query 23985 ATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACG 24044 || |||| ||| | | ||| || | ||| ||| | ||||| || | |||| | Sbjct 921 GTCTTTAACATCAGTAGCTAAGTCTATTTCCTCAGCAGTCCAGAAGCAAGCCATTTAATC 980 Query 24045 CTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 || ||||| ||| |||||||| | | || || |||||||| || Sbjct 981 TTTGTACATCTTCCATATATCATTGTATCTGATGGGTAATATTACAAA 1028 >seq1030 Length=862 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 64427 GATGTTATTGGAATTGATGAAGGGCAATTTTTTACTGATATAGTTGAATTTTCTGAAAAT 64486 ||||||||||| || || ||||| ||||| ||| | ||| |||| ||||| | || || Sbjct 513 GATGTTATTGGCATAGACGAAGGTCAATTCTTTGCAGATGTAGTAGAATTCTGCGAGAAA 454 Query 64487 ATGGCCAATAAAGGAAAAATTGTAATTGTTTCAGCGTTAGATGCGACATATAAAAGAGAA 64546 ||||||||| || || || ||||| ||| | ||| | |||| |||| |||| || Sbjct 453 GTGGCCAATATGGGCAAGATAGTAATAGTTGCTGCGCTTGATGGTACATTCTAAAGGCAA 394 Query 64547 CCATTTGGTAATATCCTAAATCTAGTTCCATTAGCTGAAAAAGT 64590 | ||||| ||| || | ||| | ||| | || || ||||| Sbjct 393 GCCTTTGGCTCTATACTTGAGCTAATACCAATGGCAGAGAAAGT 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521356037461600