Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq6873 93.3 6e-14 seq8537 87.8 2e-12 >seq6873 Length=3768 Score = 93.3 bits (102), Expect = 6e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 155897 ATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTC 155956 ||| |||| | || |||| | |||||| || ||||||||||||| | ||||| || Sbjct 1290 ATCAGGTAGTGATATCTCTAAGTGCAATTCTAAACGCCCAGGTCTTATCATAGCTTCATC 1231 Query 155957 AATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACC 156016 ||| | ||| |||||||||||||||||||| | ||||| ||||| || ||||| Sbjct 1230 AATCATGTCCTTTCTGTTGGTCATACCTATGACAAGGATGTTATTTAAGCTGTCAACACC 1171 Query 156017 GTCTATTTTAGACAATAATTGATTGACTACGGCGTCGTG 156055 ||||| || || | | ||| || ||||| || || || Sbjct 1170 ATCTATCTTCGATAGGAGTTGGTTAACTACTGCTTCATG 1132 >seq8537 Length=3923 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 |||||||||||| ||| || | |||||| ||||||| |||||||||||| | Sbjct 857 GTTAAAATAAAAACAAGGTCCGTAAGAATACCTTAAATAGGAGATAAATTTGCTAGTAGG 798 Query 63778 ACAGCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAA 63837 | | | ||||| ||| ||||||| ||| || ||||||||||||| || || | | Sbjct 797 CATGGTTAGAAAGGAACGGTCGGTATGACCTATAGATAAGAAGATATGCCATTCACTAGA 738 Query 63838 GACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGAC 63893 || || || || || ||||| | |||||||| || || | || || | ||||| Sbjct 737 GAAGGAATTGTGCCTGATCTTATTATCAATCCTCATGCCATACCTAGCAGAATGAC 682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666906396620640