Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20astronyxis_20[genbank_20GCA_5F000826245.1_202015-01- 07] 98,248 sequences; 83,432,518 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq96095 111 2e-19 seq98102 109 6e-19 seq97583 107 2e-18 seq93431 107 2e-18 seq97451 104 2e-17 seq89129 104 2e-17 seq85083 102 8e-17 seq97888 100 3e-16 seq96238 100 3e-16 seq95614 100 3e-16 seq95329 100 3e-16 seq93742 100 3e-16 seq95791 98.7 1e-15 seq85724 96.9 4e-15 seq93505 93.3 4e-14 seq93432 93.3 4e-14 seq43761 86.0 6e-12 >seq96095 Length=8987 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || |||||||| || || | || | ||||| ||||| || ||||| |||||||| || Sbjct 7140 TGTCCTCCTCGCAATCGGAGCACCAGATGAAGAGTAGACTCCTTTTGGATGTTGTAGTCA 7081 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 || || | || ||||| || || || ||| |||||| |||||||||||| ||| Sbjct 7080 GCCAAGGTACGACCATCCTCGAGCTGCTTTCCTGCAAAGATCAAACGTTGCTGATCAGGA 7021 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || |||||||| ||||| || || || || | | || | |||| | | || Sbjct 7020 GGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATGCTGTCAGAGCTCTCC 6961 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || | ||| | |||||||| |||||||| || ||||| || |||||| Sbjct 6960 ACCTCCAAAGTGATGGTCTTGCCAGTCAATGTCTTCACGAAGATCTGCATA 6910 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| || || || || || |||||||| || || |||| ||| || Sbjct 6195 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGGCCGTCCTCC 6136 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || |||||||| ||| |||||||||||||||| || ||||| ||||| || ||||| Sbjct 6135 AGCTGTTTACCTGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 6076 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | || | | || | | || ||||||| || | |||||| Sbjct 6075 ATCTTCTGCTTCACGTTCTCAATAGAATCAGAGCTCTCCACTTCAAGGGTAATAGTCTTG 6016 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 || |||||||| || ||||| |||||||| Sbjct 6015 CCAGTCAATGTCTTCACGAAGATTTGCAT 5987 >seq98102 Length=5793 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| | || |||| ||| | |||| ||||| || || || |||||||| || Sbjct 4146 GCCTCCCCTCAAGCGCAGAACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGC 4087 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| ||| ||||| || || || ||| |||||| ||| ||||| || || || Sbjct 4086 CAGCGTGCGGCCGTCCTCGAGCTGCTTGCCTGCAAAGATCAAACGCTGCTGGTCAGGTGG 4027 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || ||||| || || || || | | || | |||| | || ||||| Sbjct 4026 GATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGCTGTCAGAGGACTCTAC 3967 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| ||| | ||||| |||||||| || || |||||||||||||| Sbjct 3966 TTCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTCACGAATATTTGCAT 3919 >seq97583 Length=3224 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || |||||||| |||||||| || || |||| || || ||||| || || Sbjct 2732 GTGGACTCTTTTTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCAAGTTGCTTGCCT 2673 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| ||||||| || |||||||||||||| |||||||| ||||| || || || || Sbjct 2672 GCAAAGATCAGCCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTG 2613 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | |||| | || || ||||| | ||| | |||||||| |||||||| Sbjct 2612 ACGTTCTCGATGCTGTCAGAGGACTCGACTTCCAAAGTGATGGTCTTGCCAGTCAATGTC 2553 Query 143168 TTTACGAATATTTGCATAG 143186 || || || || ||||||| Sbjct 2552 TTCACAAAGATCTGCATAG 2534 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| | || || | || || || | || ||||| ||||| || ||||| ||| Sbjct 2991 GCCTCCCCTCAAGCGAAGCACCAAGTGGAGAGTCGATTCCTTTTGAATATTGTAGTCGGC 2932 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| |||||| | || || || ||| |||||||||| |||||||||||||| Sbjct 2931 AAGAGTGCGGCCGTCTTCCAACTGCTTGCCTGCAAAGATCAGACGCTGCTGATCGGGAGG 2872 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || || || || | | ||| | |||| | || || || Sbjct 2871 GATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTTTCGATGCTGTCAGAGGACTCCAC 2812 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | ||||| || ||||| ||||| || || || |||||| Sbjct 2811 CTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACAAAGATCTGCATA 2763 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| | |||| || || |||| || || || || || |||||||| || Sbjct 3219 GCCTCCTCTCAGGCGCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGC 3160 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| ||| || || || || ||||| |||||| |||||||||||| || || Sbjct 3159 CAGAGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGATCAGGTGG 3100 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || |||||||| ||| || || || | | || | | || | || ||||| Sbjct 3099 AATACCCTCTTTGTCTTGAATCTTCTGCTTGACGTTCTCAATAGAATCAGAGGACTCTAC 3040 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | || ||||| |||||||| || || || || ||||| Sbjct 3039 CTCAAGGGTAATGGTTTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 2992 >seq93431 Length=4049 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| |||||||| || || |||||||| ||| || |||| ||| || || || Sbjct 3720 TGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTCAAGCTGC 3661 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || ||||| |||||| ||| |||||||||||||| ||||| || ||||| ||| || Sbjct 3660 TTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGAATCTTC 3601 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || || | | || | | ||| | || ||| ||||| | ||| | ||||| || || Sbjct 3600 TGCTTGACGTTCTCGATAGAGTCAGAGGATTCGACTTCCAGAGTAATTGTCTTACCAGTG 3541 Query 143162 AATGTTTTTACGAATATTTGCATAGCTTA 143190 | || || ||||| || ||||| ||||| Sbjct 3540 AGGGTCTTGACGAAAATCTGCATTGCTTA 3512 Score = 104 bits (114), Expect = 2e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| ||||| || ||||| |||||||||||| || || | ||| ||| Sbjct 3953 ACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAATCG-GCAGAGTACGACCGTCCTCG 3895 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || |||||||| |||||||||| |||||||| || || |||||||| ||||| | Sbjct 3894 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGA 3835 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | || | | || | | || || |||| || | |||||| Sbjct 3834 ATCTTCTGCTTGACGTTCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATGGTCTTG 3775 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| || || ||||| || ||||| Sbjct 3774 CCAGTCAAGGTCTTGACGAAGATCTGCAT 3746 >seq97451 Length=8672 Score = 104 bits (114), Expect = 2e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| ||||| || ||||| |||||||||||| || || | ||| ||| Sbjct 8364 ACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAATCG-GCAGAGTACGACCGTCCTCG 8422 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || |||||||| |||||||||| |||||||| || || |||||||| ||||| | Sbjct 8423 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGA 8482 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | || | | || | | || || |||| || | |||||| Sbjct 8483 ATCTTCTGCTTGACGTTCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATGGTCTTG 8542 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| || || ||||| || ||||| Sbjct 8543 CCAGTCAAGGTCTTGACGAAGATCTGCAT 8571 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || ||||| | ||||| || ||||| |||||||| ||| | || | ||| ||| Sbjct 7383 ACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGCAAGAGTACGACCGTCCTCG 7442 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || |||||||| |||||| ||| |||||||||||||| ||||| || ||||| Sbjct 7443 AGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGT 7502 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | || | | || | | || ||||| | || | |||||| Sbjct 7503 ATCTTCTGCTTCACATTCTCGATGCTATCAGAAGACTCAACTTCGAGGGTGATGGTCTTG 7562 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 |||||||| || || ||||| || |||||| || Sbjct 7563 CCGGTCAAGGTCTTAACGAAGATCTGCATACCT 7595 Score = 96.9 bits (106), Expect = 4e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| || ||||| |||||||| ||| | || | ||| ||||| || || ||| Sbjct 7623 GTAGACTCCTTTTGGATGTTGTAGTCGGCAAGAGTACGACCGTCCTCGAGCTGCTTGCCA 7682 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||| |||||||||||||| ||||| || ||||| || || ||||| Sbjct 7683 GCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCTGTTTC 7742 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | | || | | || ||||| | || | |||||||||||||| || Sbjct 7743 ACATTCTCGATACTATCAGAAGACTCAACTTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 7802 Query 143168 TTTACGAATATTTGCATAGCT 143188 || ||||| || |||||| || Sbjct 7803 TTAACGAAGATCTGCATACCT 7823 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| ||||| || ||||| |||||||| || || |||| ||| ||| Sbjct 7155 ACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCG 7214 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || || || |||||| ||| |||||||||||||| ||||| || ||||| | Sbjct 7215 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGA 7274 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | || | | || | | || ||||| | || | |||||| Sbjct 7275 ATCTTCTGCTTGACGTTCTCAATACTATCAGAAGACTCAACTTCRAGGGTGATGGTCTTG 7334 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| || || ||||| || ||||| Sbjct 7335 CCAGTCAAAGTCTTGACGAAGATCTGCAT 7363 >seq89129 Length=1308 Score = 104 bits (114), Expect = 2e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| ||||| || ||||| |||||||||||| || || | ||| ||| Sbjct 97 ACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAATCG-GCAGAGTACGACCGTCCTCG 155 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || |||||||| |||||||||| |||||||| || || |||||||| ||||| | Sbjct 156 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGA 215 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | || | | || | | || || |||| || | |||||| Sbjct 216 ATCTTCTGCTTGACGTTCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATGGTCTTG 275 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 || ||||| || || ||||| || ||||| Sbjct 276 CCAGTCAAGGTCTTGACGAAGATCTGCAT 304 >seq85083 Length=2832 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| | | |||| ||| | |||| || || || ||||| |||||||||||| Sbjct 277 GCCTCCCCTAAGGCGCAGAACGAGGTGAAGGGTGGACTCCTTTTGAATGTTGTAATCGGC 336 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| || ||||| || || || ||| |||||| |||||||||||| ||||| Sbjct 337 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCTGCAAAGATCAAACGTTGCTGATCAGGAGG 396 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||| ||||| || || || || | | || | | ||| | || ||| || Sbjct 397 GATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCAATAGAGTCAGAGGATTCGAC 456 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||| || | ||||| || || | || || ||||| || |||||| Sbjct 457 CTCAAGTGTAATAGTCTTTCCAGTGAGCGTCTTCACGAAAATCTGCATA 505 >seq97888 Length=8055 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| | | ||| | || || |||| ||||| || ||||| |||||||||||| Sbjct 2212 GCCTCCCCTGAGACGAAGCACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGC 2153 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| || || || || || ||||| |||| || || |||||||| || || Sbjct 2152 CAAGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGGGGG 2093 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| |||||||| || ||||| |||| | || | | || | || ||| || Sbjct 2092 GATGCCCTCTTTGTCCTGGATCTTTTGCTTTACGTTCTCAATGGAATCAGAGGATTCGAC 2033 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | |||||||| ||||| || || || || || ||||| Sbjct 2032 CTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 1985 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||| ||| | |||| || ||||| || || |||||||| || || |||| Sbjct 1971 CGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGGCCA 1912 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || || || | |||| ||| ||||||||||| || ||||| || ||| Sbjct 1911 TCCTCGAGCTGCTTGCCTGCGAAAATCAAACGCTGCTGATCGGGTGGAATGCCCTCCTTG 1852 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || || || || | | || | | ||| | | || ||||||| || | Sbjct 1851 TCCTGGATCTTCTGCTTCACATTCTCAATAGAGTCAGAGCTCTCCACTTCAAGGGTAATA 1792 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||| |||||||| || ||||| |||||||| Sbjct 1791 GTCTTGCCAGTCAATGTCTTCACGAAGATTTGCAT 1757 >seq96238 Length=7505 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || ||||| | ||||| || || || |||||||| || || |||| ||| || Sbjct 7225 ACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCGTCCTCA 7166 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || ||||| |||||| ||| |||||||||||||| |||||||| || || Sbjct 7165 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCTTCCTTATCTTGG 7106 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || |||| | || | | ||| | | || || |||| || | |||||| Sbjct 7105 ATCTTCTGCTTTACATTCTCAATGGAGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTG 7046 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| || || ||||| ||||||||| Sbjct 7045 CCAGTCAAGGTCTTGACGAAGATTTGCATA 7016 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || ||||| | ||||| || || || |||||||| || || |||| || || Sbjct 6997 ACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCA 6938 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || ||||| |||||| ||| |||||||||||||| ||||| |||||||| | Sbjct 6937 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCCTCTTTGTCTTGA 6878 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | || | | ||| | | || || |||| || | |||||| Sbjct 6877 ATCTTCTGCTTGACGTTCTCAATGGAGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTG 6818 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || ||||| || || ||||| || |||||| || Sbjct 6817 CCAGTCAAAGTCTTGACGAAAATCTGCATACCT 6785 >seq95614 Length=2048 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || ||||| | ||||| || || || |||||||| || || |||| ||| || Sbjct 411 ACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCGTCCTCA 352 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || ||||| |||||| ||| |||||||||||||| |||||||| || || Sbjct 351 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCTTCCTTATCTTGG 292 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || |||| | || | | ||| | | || || |||| || | |||||| Sbjct 291 ATCTTCTGCTTTACATTCTCAATGGAGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTG 232 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| || || ||||| ||||||||| Sbjct 231 CCAGTCAAGGTCTTGACGAAGATTTGCATA 202 >seq95329 Length=2102 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || ||||| | ||||| || || || |||||||| || || |||| ||| || Sbjct 1692 ACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCGTCCTCA 1751 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || ||||| |||||| ||| |||||||||||||| |||||||| || || Sbjct 1752 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCTTCCTTATCTTGG 1811 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || |||| | || | | ||| | | || || |||| || | |||||| Sbjct 1812 ATCTTCTGCTTTACATTCTCAATGGAGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTG 1871 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| || || ||||| ||||||||| Sbjct 1872 CCAGTCAAGGTCTTGACGAAGATTTGCATA 1901 >seq93742 Length=2862 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| || || |||||||| |||||||| ||| | || | ||| ||| Sbjct 326 ACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAGTCGGCTAAGGTACGGCCGTCCTCG 385 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || ||||||||| |||| ||||||||||| || ||||| |||||||| ||||| Sbjct 386 AGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGG 445 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || || | | || | | ||| | || ||| || |||| || | ||||| Sbjct 446 ATCTTCTGCTTCACGTTCTCAATAGAGTCAGAGGATTCGACCTCAAGTGTAATAGTCTTT 505 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || | || || ||||| || |||||| Sbjct 506 CCAGTGAGCGTCTTCACGAAAATCTGCATA 535 >seq95791 Length=22242 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| || | ||||| || | |||| ||||| || || || |||||||| || Sbjct 8647 GCCTCCACGCAGGCGCAACACGAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGC 8588 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| ||| || || || || |||||| |||| || || |||||||| ||||| Sbjct 8587 GAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCTGGAGG 8528 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || ||||| || | | || | |||| | | || || Sbjct 8527 GATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCAATGCTGTCAGAGCTCTCCAC 8468 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | ||| || ||||| | |||||||||||| || |||||| Sbjct 8467 CTCTAGAGTAATCGTTTTTCCGGTGAGTGTTTTTACGAAAATCTGCATA 8419 >seq85724 Length=578 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| | || || | || || || | || ||||| ||||| || ||||| ||| Sbjct 234 GCCTCCCCTCAAGCGAAGCACCAAGTGGAGAGTCGATTCCTTTTGAATATTGTAGTCGGC 293 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| |||||| | || || || ||| |||||||||| |||||||||||||| Sbjct 294 AAGAGTGCGGCCGTCTTCCAACTGCTTGCCTGCAAAGATCAGACGCTGCTGATCGGGAGG 353 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| || ||||| || || || || | | || | |||| | || ||||| Sbjct 354 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCAATGCTGTCAGAGGACTCTAC 413 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | ||||||||| || | || || ||||| || ||||| Sbjct 414 CTCAAGGGTAATCGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 461 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| | |||| || || |||| || || || || || |||||||| || Sbjct 6 GCCTCCTCTCAGGCGCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGC 65 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| ||| || || || || ||||| |||||| |||||||||||| || || Sbjct 66 CAGAGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGATCAGGTGG 125 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || |||||||| ||| || || || | | || | | || | || ||||| Sbjct 126 AATACCCTCTTTGTCTTGAATCTTCTGCTTGACGTTCTCAATAGAATCAGAGGACTCTAC 185 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | || ||||| |||||||| || || || || ||||| Sbjct 186 CTCAAGGGTAATGGTTTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 233 >seq93505 Length=5308 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 142997 TTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATC 143056 || || |||||||| ||| || |||| ||| || || || || ||||| ||||| Sbjct 5306 TTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATC 5247 Query 143057 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCC 143116 | ||| |||||||||||||| ||||| || ||||| ||| || || || | | || Sbjct 5246 AAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGAATCTTCTGCTTGACGTTCTCG 5187 Query 143117 ACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAAT 143176 | | ||| | || ||| ||||| | ||| | ||||| || || | || || ||||| Sbjct 5186 ATAGAGTCAGAGGATTCGACTTCCAGAGTAATTGTCTTACCAGTGAGGGTCTTGACGAAA 5127 Query 143177 ATTTGCATAGCTTA 143190 || ||||| ||||| Sbjct 5126 ATCTGCATTGCTTA 5113 >seq93432 Length=5284 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 142997 TTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATC 143056 || || |||||||| ||| || |||| ||| || || || || ||||| ||||| Sbjct 3 TTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATC 62 Query 143057 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCC 143116 | ||| |||||||||||||| ||||| || ||||| ||| || || || | | || Sbjct 63 AAACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGAATCTTCTGCTTGACGTTCTCG 122 Query 143117 ACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAAT 143176 | | ||| | || ||| ||||| | ||| | ||||| || || | || || ||||| Sbjct 123 ATAGAGTCAGAGGATTCGACTTCCAGAGTAATTGTCTTACCAGTGAGGGTCTTGACGAAA 182 Query 143177 ATTTGCATAGCTTA 143190 || ||||| ||||| Sbjct 183 ATCTGCATTGCTTA 196 >seq43761 Length=397 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| || || || |||||||| ||| || |||| || || || || |||||| Sbjct 95 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCCAGCTGCTTACCA 154 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||| || ||||||||||| ||||| || ||||| || || || || Sbjct 155 GCGAAGATCAAACGCTGTTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCTGCTTG 214 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | | ||| | | || || |||| || | |||||||| ||||| || Sbjct 215 ACGTTCTCAATGGAGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTC 274 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| || ||||| Sbjct 275 TTAACGAAGATCTGCAT 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506391735615360