Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20astronyxis_20[genbank_20GCA_5F000826245.1_202015-01- 07] 98,248 sequences; 83,432,518 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq97888 84.2 2e-11 >seq97888 Length=8055 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 |||||| || || ||||| || ||||| |||||||||||| ||| || ||| || Sbjct 2194 CACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGCCAAGGTGCGGCCATCCTC 2135 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 | || ||||| || | || || | ||| ||||| ||| | ||| |||||||| Sbjct 2134 AAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCAGGGGGGATGCCCTCTTTGTCCTG 2075 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 || ||||| || || | ||| ||||| | ||| || | ||| ||||| || Sbjct 2074 GATCTTTTGCTTTACGTTCTCAATGGAATCAGAGGATTCGACCTCAAGGGTGATGGTCTT 2015 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||| ||||| || || ||||| || |||||| Sbjct 2014 GCCAGTCAAAGTCTTCACAAAGATCTGCATT 1984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419084787335688