Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20astronyxis_20[genbank_20GCA_5F000826245.1_202015-01- 07] 98,248 sequences; 83,432,518 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq96095 84.2 3e-11 >seq96095 Length=8987 Score = 84.2 bits (92), Expect = 3e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || ||||| || ||||| || || ||| | || || ||| | Sbjct 5760 TGCAAATCTTCGTCAAGACATTGACTGGAAAGACCATCACTTTGGAAGTCGAATCCTCTG 5819 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||| | || || || | || || ||| ||| |||||||| ||||| ||||| | Sbjct 5820 ACTCTATCGAGAACGTGAAGCAGAAGATCCAAGATAAGGAAGGCATCCCACCTGATCAGC 5879 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | |||||||||||||| || || | || || | ||| | | || || || | Sbjct 5880 AGCGTCTCATTTTTGCAGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCTGACTACAACA 5939 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| || |||| || || | || || || ||||| Sbjct 5940 TTCAAAAGGAATCCACCCTCCACTTGGTCCTTCGTTTGAGGGGAGG 5985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785200909044160