Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq932 123 2e-23 seq1445 116 3e-21 seq1223 116 3e-21 seq623 114 1e-20 seq638 113 4e-20 seq422 109 5e-19 seq414 109 5e-19 seq447 107 2e-18 seq1307 105 6e-18 seq1225 96.9 3e-15 seq1224 96.9 3e-15 >seq932 Length=1165899 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || ||||| | ||| || | || | ||||||||||| || ||||| ||||| Sbjct 390353 GTTGCCGCCGCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 390412 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| || ||||||| ||||| ||||| || | ||||| | |||||| || Sbjct 390413 GGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGATCGGG 390472 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||| |||||||| ||||| || ||||| | ||| || || | || ||| Sbjct 390473 AGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCGCTGGACTC 390532 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||||||||| | ||| ||||| || || ||||| Sbjct 390533 GACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 390583 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || || | || | ||| |||||||| || ||||| ||||| ||| Sbjct 390585 CCGCCGCGCAGACGAAGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 390644 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || |||| || ||||| ||||| || | || || | ||||||||| || Sbjct 390645 AGGGTACGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGG 390704 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CGT 21127 | ||| |||||||| |||||| || ||||| | ||| || || || |||| || Sbjct 390705 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTC--CGAGCTCTCGA 390762 Query 21128 T-TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||||||||| | ||| ||||| || || ||||| Sbjct 390763 CCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 390811 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||| || ||||| || ||||| ||||| ||| Sbjct 391041 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCC 391100 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || || | ||||||||| || Sbjct 391101 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 391160 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||||| || || | ||| || || | | ||| Sbjct 391161 ATGCCTTCCTTGTCCTGAATCTTTTGCTTAACGTTCTCGATGGTGTCGCTCGACTCGACC 391220 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||||||||| | || || || || || |||||| Sbjct 391221 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 391268 >seq1445 Length=562458 Score = 116 bits (128), Expect = 3e-21 Identities = 165/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | |||||| | || | ||||||||||| || ||||| ||||| Sbjct 28405 GTTGCCGCCACGGAGACGGAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 28346 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| || ||||||| ||||| ||||| || | ||||| | |||||| || Sbjct 28345 GGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGATCAGG 28286 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | || |||||||| |||||| || ||||| | ||| || || | || ||| Sbjct 28285 GGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTC 28226 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || | | | || ||||| || || ||||| Sbjct 28225 GACCTCGAGGGTGATGGTCTTACCCG-TGAGGTCTTGACGAAGATCTGCAT 28176 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 27946 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 27887 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| || || || | || || | |||||| || ||| Sbjct 27886 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGA 27827 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||||| ||||| | ||| || || | | ||| Sbjct 27826 ATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACC 27767 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||||||||| | || || || || || |||||| Sbjct 27766 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 27719 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| ||||| || || ||||||| ||||| ||||| Sbjct 28144 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 28085 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || ||| | || |||||||| |||||| || ||| Sbjct 28084 GCGAAGATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTC 28025 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | ||| || | ||||| ||||||||||| | || Sbjct 28024 ACGTTCTCAATCGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTC 27965 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 27964 TTGACGAAGATCTGCAT 27948 >seq1223 Length=762 Score = 116 bits (128), Expect = 3e-21 Identities = 165/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | |||||| | || | ||||||||||| || ||||| ||||| Sbjct 36 GTTGCCGCCACGGAGACGGAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 95 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| || ||||||| ||||| ||||| || | ||||| | |||||| || Sbjct 96 GGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGATCAGG 155 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | || |||||||| |||||| || ||||| | ||| || || | || ||| Sbjct 156 GGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTC 215 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || | | | || ||||| || || ||||| Sbjct 216 GACCTCGAGGGTGATGGTCTTACCCG-TGAGGTCTTGACGAAGATCTGCAT 265 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 495 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 554 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| || || || | || || | |||||| || ||| Sbjct 555 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGA 614 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||||| ||||| | ||| || || | | ||| Sbjct 615 ATACCCTCCTTGTCCTGAATCTTTTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACC 674 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||||||||| | || || || || || |||||| Sbjct 675 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 722 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| ||||| || || ||||||| ||||| ||||| Sbjct 297 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 356 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || ||| | || |||||||| |||||| || ||| Sbjct 357 GCGAAGATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTC 416 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | ||| || | ||||| ||||||||||| | || Sbjct 417 ACGTTCTCAATCGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTC 476 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 477 TTGACGAAGATCTGCAT 493 >seq623 Length=316623 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || || | |||| ||||||||||| || ||||| ||||| ||| Sbjct 68339 CCACCACGCAGTCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 68398 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | ||||||||| || Sbjct 68399 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 68458 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CG- 21126 | ||| |||||||| |||||| || ||||| | ||| || | ||| |||| || Sbjct 68459 ATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATGGTGT--CCGAGCTCTCGA 68516 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || || || || || ||||| Sbjct 68517 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 68565 >seq638 Length=1393837 Score = 113 bits (124), Expect = 4e-20 Identities = 167/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | |||||| | || | ||||||||||| || ||||| ||||| Sbjct 262567 GTTGCCGCCACGGAGACGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 262626 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 || ||||| || ||||||| ||||| ||||| || | || || | ||||||||| Sbjct 262627 GGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGG 262686 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||| |||||||| |||||| || ||||| | ||| || | ||| |||| Sbjct 262687 AGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATTCTCGATCGTGT--CCGAGCTC 262744 Query 21125 -CG-TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | ||| || ||||| ||||| | ||| ||||| || || ||||| Sbjct 262745 TCGACCTCGAGGGTGATCGTCTTACCGGTCAGCGTCTTGACGAAGATCTGCAT 262797 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || || || || |||| || ||||| ||||| Sbjct 262829 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCGTCTTCGAGCTGCTTGCCA 262888 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | || |||||||| |||||| || ||| Sbjct 262889 GCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTC 262948 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| ||||| | | ||| || | ||||| ||||||||||| | || Sbjct 262949 ACGTTCTCGATGGTATCGCTCGACTCGACCTCGAGAGTAATCGTCTTGCCGGTAAGGGTC 263008 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 263009 TTGACAAAGATCTGCAT 263025 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || || || || ||||||| ||||| || || Sbjct 263057 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTTCCG 263116 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | ||||| | ||||||||| || | |||||||||||| ||||| || ||| Sbjct 263117 GCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTC 263176 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | | ||| || | ||| |||||||||||||| | || Sbjct 263177 ACGTTCTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 263236 Query 21159 TTGACAAATATTTGCATT 21176 || || || || |||||| Sbjct 263237 TTCACGAAGATCTGCATT 263254 >seq422 Length=916903 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 210672 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 210731 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| ||||| || | || || | ||||||||| ||| Sbjct 210732 AGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 210791 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || ||||| | ||| || || | || ||| Sbjct 210792 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCAACC 210851 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| ||||||||||| || | || || || || |||||||| || Sbjct 210852 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCATGTT 210901 Score = 104 bits (114), Expect = 2e-17 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| |||||||| || ||||| ||||| || || || || ||||||| ||||| ||||| Sbjct 624739 AGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCC 624680 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | || || | ||||||||| ||| | || |||||||| |||||| || || Sbjct 624679 AGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTT 624620 Query 21098 CACCTGGCCGACAGTATCACCGGGCTC-CGTT-TCCACGGTAATGGTCTTGCCGGTTAAC 21155 ||| | ||| || || || |||| || || | ||| |||||||||||||| | Sbjct 624619 CACGTTTTCGATGGTGTC--CGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGA 624562 Query 21156 GTTTTGACAAATATTTGCAT 21175 || ||||| || || ||||| Sbjct 624561 GTCTTGACGAAGATCTGCAT 624542 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||| || | || | ||||||||||| || ||||| ||||| Sbjct 625000 GTTGCCACCACGGAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTC 624941 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 |||||||| || ||||||| ||||| || || || | || || | ||||||||| Sbjct 624940 AGCCAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGG 624881 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | || || ||||| ||||| || || || | ||| || || | || ||| Sbjct 624880 AGGAATACCCTCTTTGTCCTGAATCTTCTGCTTGACGTTCTCGATCGTGTCGCTGGACTC 624821 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||||||||| | ||| ||||| || || ||||| Sbjct 624820 TACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 624770 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 624540 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 624481 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || || | |||||| || || Sbjct 624480 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGA 624421 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || || | ||| || || | | ||| Sbjct 624420 ATACCCTCCTTGTCCTGAATCTTCTGCTTGACGTTCTCGATCGTGTCGCTCGACTCGACC 624361 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||||||||| | || || || || || |||||| Sbjct 624360 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 624313 >seq414 Length=771140 Score = 109 bits (120), Expect = 5e-19 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || ||||| | ||| || | || | ||| |||||||| || ||||| ||||| Sbjct 167227 GTTGCCACCGCGCAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 167168 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||||| || | ||||||| ||||| ||||| || | || || | |||||| || Sbjct 167167 GGCCAGAGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGG 167108 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||| |||||||| |||||| || ||||| | ||| || || || |||| Sbjct 167107 AGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTTTCGATCGTGTC--CGAGCTC 167050 Query 21125 -CGTT-TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | ||| |||||||||||||| | || ||||| || || ||||| Sbjct 167049 TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 166997 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || || | || | ||| |||||||| || ||||| ||||| || Sbjct 166767 CCGCCGCGCAGACGAAGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 166708 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || || | |||||| || ||| Sbjct 166707 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCAGGGGGA 166648 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || ||||| | ||| || || | | ||| Sbjct 166647 ATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTCGACTCGACC 166588 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || ||||| || || ||||| Sbjct 166587 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 166541 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 166995 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 166936 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| || | || || | |||||| || || Sbjct 166935 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCGGGAGGA 166876 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || ||||| | ||| ||||| | || ||| Sbjct 166875 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTATCGCTGGACTCGACC 166816 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||| ||||||||||| | || ||||| || || ||||| Sbjct 166815 TCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 166769 >seq447 Length=587387 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || || || || ||||||| ||||| ||||| Sbjct 241279 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 241220 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | ||||| | ||||||||| || | || |||||||| |||||||| || Sbjct 241219 GCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTTTGCTTG 241160 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | || ||| || | ||| || ||||||||||| | ||| Sbjct 241159 ACGTTCTCGATCGTGTCGCTGGACTCGACCTCGAGGGTGATAGTCTTGCCGGTCAGCGTC 241100 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 241099 TTGACGAAGATCTGCAT 241083 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || || || || ||||||| ||||| ||||| Sbjct 241051 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGGCCGTCCTCGAGCTGCTTGCCG 240992 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || || | ||| |||||||| ||||| || ||| Sbjct 240991 GCGAAGATGAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTC 240932 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | | ||| || | ||| |||||||||||||| | || Sbjct 240931 ACGTTCTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 240872 Query 21159 TTGACAAATATTTGCATT 21176 || || || || |||||| Sbjct 240871 TTCACGAAGATCTGCATT 240854 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||| || | || | ||||||||||| || ||||| ||||| Sbjct 241541 GTTGCCACCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 241482 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||||| || || ||||||| ||||| ||||| || | || || | ||||||||| Sbjct 241481 GGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGG 241422 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | || |||||||| |||||| || ||||| | ||| || || | ||| Sbjct 241421 AGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGACGACTC 241362 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || || | || ||||| || || ||||| Sbjct 241361 GACCTCGAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 241311 >seq1307 Length=263854 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||| || | || | ||||||||||| || ||||| ||||| Sbjct 170093 GTTGCCACCCCGGAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 170152 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 || ||||| || ||||||| ||||| ||||| || | || || | ||||||||| Sbjct 170153 GGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGG 170212 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | || |||||||| |||||| || ||||| | ||| || || | ||| Sbjct 170213 GGGGATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATCGTGTCGGACGACTC 170272 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || | || ||||| || || ||||| Sbjct 170273 GACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 170323 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 170553 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 170612 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| || || || | || || | |||||| || ||| Sbjct 170613 AGGGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCAGGGGGA 170672 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || ||||| | ||| || || | || ||| Sbjct 170673 ATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 170732 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||||| || ||||| || || ||||| Sbjct 170733 TCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 170779 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| ||||| || || ||||||| ||||| ||||| Sbjct 170355 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGGCCGTCCTCGAGCTGCTTGCCG 170414 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || || | ||| |||||||| |||||| || ||| Sbjct 170415 GCGAAGATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTC 170474 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | ||| || | ||| || ||||| || || | || Sbjct 170475 ACGTTTTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTACCCGTGAGGGTC 170534 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 170535 TTGACGAAGATCTGCAT 170551 >seq1225 Length=780 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 630 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 571 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || || | |||||| || || Sbjct 570 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCGGGAGGA 511 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || ||||| | ||| || || | | ||| Sbjct 510 ATACCCTCCTTGTCCTGAATCTTCTGCTTCACGTTCTCGATCGTGTCGCTCGACTCGACC 451 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| |||||||||||||| | || || || || || |||||| Sbjct 450 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 403 >seq1224 Length=756 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||| |||||||| || ||||| ||||| || Sbjct 597 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 538 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | ||||||||| || Sbjct 537 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGA 478 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || || | ||| || || | ||| Sbjct 477 ATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGACGACTCGACC 418 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| ||||||||||| || | || || || || || |||||| Sbjct 417 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422251372502036